COMPOSITIONS AND METHODS FOR THE TREATMENT OF

LIVER DISEASES AND DISORDERS ASSOCIATED WITH ONE OR BOTH OF HYPERAMMONEMIA OR MUSCLE WASTING RELATED APPLICATIONS

This application claims priority to U.S. Serial No.62/545,362 filed August 14, 2017, U.S. Serial No.62/614,214 filed January 5, 2018, and U.S. Serial No.62/697,772 filed July 13, 2018, the contents of which are each incorporated herein by reference in their entireties. BACKGROUND

An estimated 600,000 individuals in the US suffer from cirrhosis and 14,000 of these patients are in end-stage disease and await liver transplant. Studies have suggested that up to 40- 60% of cirrhosis patients have concomitant muscle wasting. The resultant frailty is a significant cause for functional decline, cirrhosis-related complications, hospitalizations, and mortality in patients with end-stage liver disease (ESLD). Liver transplant is the definitive cure for ESLD, but physical decline, independent of liver disease severity, is associated with increased risk of de-listing from transplant waitlists.

An estimated 40-50% of cirrhosis patients exhibit cirrhotic sarcopenia. Cirrhotic sarcopenia is a frequent complication in cirrhosis that adversely impacts the survival and quality of life of patients. Cirrhotic sarcopenia is a systemic disease resulting from hyperammonemia due to a dysfunctional urea cycle in cirrhosis, in which the muscle detoxifies the ammonia, but at the expense of muscle mass. Sarcopenia lowers the survival, decreases the chances of receiving a transplant, and increases the risks of cirrhosis-related complications in cirrhosis patients.

The current standard of care for patients with cirrhosis, such as patients with ESLD or cirrhotic sarcopenia, include lifestyle modifications, such as increased exercise and dietary interventions. Currently, there are no approved pharmacological interventions.

Given the lack of available therapies, there is still a need for agents, e.g., dietary compositions and therapeutics for treating liver diseases and disorders with hyperammonemia or muscle wasting, such as cirrhosis, cirrhotic sarcopenia, ESLD, hepatic insufficiency, or hepatic encephalopathy. SUMMARY

Provided herein is a composition (e.g., an Active Moiety) including amino acid entities that is useful for improving one, two, three, or more (e.g., all) of liver function,

hyperammonemia, muscle mass, or muscle function in a subject, e.g., a subject with a liver disease or disorder with one or both of hyperammonemia or muscle wasting. The composition can be used in a method of treating (e.g., reversing, reducing, ameliorating, or preventing) a liver disease or disorder with one or both of hyperammonemia or muscle wasting (e.g., cirrhosis, e.g., cirrhotic sarcopenia, End Stage Liver Disease (ESLD), hepatic insufficiency, or hepatic encephalopathy) in a subject in need thereof (e.g, a human).

In one aspect, the invention features a composition comprising, consisting of, or consisting essentially of:

a) a Branched Chain Amino Acid (BCAA) entity chosen from a leucine amino acid entity, an isoleucine amino acid entity, a valine amino acid entity, or a combination of two or three BCAA entities;

b) a Urea Cycle Amino Acid (UCAA) entity chosen from an ornithine amino acid entity, an aspartate amino acid entity, or a combination of two UCAA entities; and

c) an essential amino acid (EAA) entity chosen from a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity or a combination of two or three EAA entities;

wherein at least one amino acid entity (e.g., two, three, four, five, six, seven, or eight amino acid entities) of (a)-(c) is not provided as a peptide of more than 20 amino acid residues in length.

In some embodiments, the ornithine amino acid entity is chosen from L-ornithine, ornithine α-ketoglutarate, ornithine HCl, citrulline, or a combination thereof.

In some embodiments, one, two, or all of phenylalanine, tyrosine, and glutamine are absent from the composition, or if present, are present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, the total wt. % of (a)-(c) (e.g., three, four, five, six, seven, or eight amino acid entities in (a)-(c)) is greater than the total wt. % of other protein components (e.g., whey protein) or non-protein components (or both) in the composition on a dry weight basis, e.g., the total wt. % (a)-(c) is at least: 50 wt. %, 75 wt. %, or 90 wt. % of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, three, four, five, six, seven, or eight amino acid entities in (a)-(c) are in one or both of free amino acid form or salt amino acid form in the composition, e.g., at least: 35 wt. %, 40 wt. %, 42 wt. %, 45 wt. %, 50 wt. %, 75 wt. %, 80 wt. %, 90 wt. %, or more, of the total wt. of the composition (in dry form) is three, four, five, six, seven, or eight amino acid entities in (a)-(c) in one or both of free amino acid form or salt amino acid form in the composition.

In some embodiments, the composition comprises a combination of 19 or fewer, 18 or fewer, 15 or fewer, 12 or fewer, or 10 or fewer amino acid entities. In some embodiments, the combination comprises at least: 42 wt. %, 75 wt. %, or 90 wt. % of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, one, two, or more (e.g., all) of phenylalanine, tyrosine, or glutamine is absent from the composition, or if present, are present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, one, two, or more (e.g., all) of phenylalanine, tyrosine, or glutamine, if present, are present in one or both of free amino acid form or salt amino acid.

In some embodiments, the wt. % of the BCAA entities is at least 37 wt. %, 38 wt. %, 39 wt. %, 40 wt. %, 41 wt. %, 42 wt. %, 43 wt. %, 44 wt. %, 45 wt. %, or more of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, the wt. % of the UCAA entities is at least 25 wt. %, 26 wt. %, 27 wt. %, 28 wt. %, 29 wt. %, 30 wt. %, 31 wt. %, 32 wt. %, 33 wt. %, 34 wt. %, 35 wt. %, or more of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, the wt. % of the EAA entities is at least 16 wt. %, 17 wt. %, 18 wt. %, 19 wt. %, 20 wt. %, or more of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, the composition does not comprise a peptide of more than 20 amino acid residues in length (e.g., whey protein), or if a peptide of more than 20 amino acid residues in length is present, the peptide is present at less than: 10 weight (wt.) %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less of the total wt. of amino acid entities or total components of the composition (in dry form).

In some embodiments, the composition has one, two, or three of the following features: d) the wt. % of the combination of three of the BCAA entities is greater than the wt. % of the UCAA entity or the combination of two of the UCAA entities, e.g., the wt. % of the combination of three of the BCAA entities is at least 5% greater than the wt. % of the UCAA entity or the combination of two of the UCAA entities; e.g., the wt. % of the combination of three of the BCAA entities is at least 10%, 15%, 20%, or more greater than the wt. % of the UCAA entity or the combination of two of the UCAA entities;

e) the wt. % of the combination of three of the BCAA entities is greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c); e.g., the wt. % of the combination of three of the BCAA entities is at least 30% greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c); e.g., the wt. % of the combination of three of the BCAA entities is at least 40%, 50%, or 55%, or more greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c);

f) the wt. % of the combination of the UCAA entity or two of the UCAA entities is greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c); e.g., the wt. % of the UAA entity or the combination of two of the UCAA entities is at least 25% greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c); e.g., the wt. % of the UCAA entity or the combination of two of the UCAA entities is at least 30%, 35%, 40%, or more greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c); or

g) a combination of two or three of (d)-(f).

In some embodiments, a wt. ratio of the BCAA entity or BCAA entities : the UCAA entity or UCAA entities : the EAA entity or EAA entities in (c) is 20+/- 15% : 15 +/- 15%: 9+/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, three, four, five, six, seven, or eight amino acid entities in (a)-(c) is selected from Table 1.

In some embodiments, the composition (e.g., the Active Moiety) comprises, consists of, or consists essentially of: a) a leucine amino acid entity chosen from:i) L-leucine or a salt thereof, ii) a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L-leucine, or iii) β-hydroxy-β-methylbutyrate (HMB) or a salt thereof; b) one or both of: i) an ornithine amino acid entity chosen from L-ornithine or a salt thereof or a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L-ornithine; or ii) an aspartate amino acid entity chosen from L-aspartate or a salt thereof or a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L- aspartate; and c) an EAA entity chosen from: i) L-histidine or a salt thereof, ii) a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L-histidine, iii) L-lysine or a salt thereof, iv) a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L-lysine, v) L-threonine or a salt thereof, or vi) a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L- threonine. In some embodiments, the composition further comprises one or both of an isoleucine amino acid entity or a valine amino acid entity, wherein one or both of the isoleucine amino acid entity or the valine amino acid entity is not provided as a peptide of more than 20 amino acid residues in length.

In some embodiments, the isoleucine amino acid-entity is L-isoleucine or a salt thereof or a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L-isoleucine. In some embodiments, the valine amino acid-entity is L- valine or a salt thereof or a dipeptide or salt thereof, or tripeptide or salt thereof, comprising L-valine.

In some embodiments, a wt. ratio of the leucine amino acid entity : the isoleucine amino acid entity : the valine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the histidine amino acid entity : the threonine amino acid entity : the lysine amino acid entity is 8+/- 20% : 4+/- 20% : 8 +/- 20% : 7.5+/- 20% : 7.5+/- 20% : 3+/- 20% : 3+/- 20% : 3+/- 20%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the composition comprises, consists of, or consists essentially of: L-leucine or a salt thereof, L-isoleucine or a salt thereof, L-valine or a salt thereof, L-ornithine or a salt thereof, L-aspartate or a salt thereof, L-histidine or a salt thereof, L-threonine or a salt thereof, and L-lysine or a salt thereof (e.g., L-lysine acetate).

In some embodiments, the composition (e.g., the Active Moiety) is formulated with a pharmaceutically acceptable carrier. In some embodiments, the composition (e.g., the Active Moiety) is formulated as a dietary composition. In some embodiments, the dietary composition is chosen from a medical food, a functional food, or a supplement. In another aspect, the invention features a method of improving one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function, comprising administering to a subject with cirrhosis an effective amount of a composition (e.g., an Active Moiety) of any of the aspects or embodiments disclosed herein, thereby improving one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function.

Another aspect of the invention features a method of improving or treating a symptom selected from one, two, three, four, five, six, seven, eight, nine, 10, 11, 12, 13, 14, 15, 16, 17, or more (e.g., all) of hyperammonemia, ascites or complications associated with ascites, variceal bleeding, infection, hepatic encephalopathy, ammonia toxicity, hepatic insufficiency, decreased urea synthesis, inflammation of hepatic tissue, fibrosis, cirrhosis, muscle wasting, muscle catabolism, muscle atrophy, hypoalbuminemia, malnutrition, frailty, or coagulopathy, comprising administering to a subject in need thereof an effective amount of a composition (e.g., an Active Moiety) of any of the aspects or embodiments disclosed herein, thereby improving or treating the symptom in the subject.

In another aspect, the invention features a method for treating or preventing a liver disease or disorder characterized by one or both of hyperammonemia or muscle wasting, comprising administering to a subject in need thereof an effective amount of a composition (e.g., an Active Moiety) of any of the aspects or embodiments disclosed herein, thereby treating the liver disease or disorder or muscle wasting in the subject.

In some embodiments, the subject has cirrhosis. In some embodiments, the subject has cirrhotic sarcopenia. In some embodiments, the subject has hepatic insufficiency. In some embodiments, the subject has End Stage Liver Disease. In some embodiments, the subject has hepatic encephalopathy.

In some embodiments, administration of the composition results in one, two, three, four, five, six, seven, eight, nine, ten, or more (e.g., all) of: a) increased level of BCAAs; b) decreased level of aromatic amino acids (AAAs); c) decreased level of ammonia; d) increased level of protein, e.g., increased protein synthesis; e) increased activation of mTORC1; f) decreased level of myostatin; g) decreased level of creatinine; h) increased level of albumin; i) decreased level of bilirubin; j) increased Fischer’s ratio (e.g., increased level of BCAAs relative to the level of AAAs); or k) an increased level of valine relative to a level of phenylalanine. BRIEF DESCRIPTION OF THE DRAWINGS

FIG.1 is a schematic showing how the composition of the invention can reprogram the disordered multifactorial cascade of ammonia-induced muscle wasting in liver diseases and disorders, such as cirrhosis, by improving one, two, three, or four of a defective urea cycle, muscle wasting, plasma amino acid imbalance, or gut ammonia production.

FIG.2 is a schematic showing the design of a clinical study featuring the administration of an amino acid composition to subjects having hepatic insufficiency. Arrows indicate the crossover design for 2 different dosages (14.7 g TID and 4.9 g TID) of the amino acid composition (dosed over 15 days per period) with a control group. PK and physiological assessments of structure (body weight and composition) and function (hand grip, chair stand, and balance assessment) were determined on Day 1, Day 8, and Day 15 of each period.

FIGS.3A-3B are a series of graphs showing the Fischer’s ratio (FR) and valine :

phenylalanine ratio (VPR) of subjects on Day 1, Day 8, and Day 15 of Period 1 and Period 2 of the clinical study. Measurements are mean +/- standard error of the mean (SEM). The number of subjects in the 14.7 g TID amino acid composition to control group was 9. The number of subjects in the control to 4.9 g TID amino acid composition group was 7.

FIGS.4A-4B are a series of graphs showing a negative correlation between levels of ammonia and the FR and VPR of subjects administered 14.7 g TID of the amino acid

composition on Day 15 of Period 1 of the clinical study.

FIGS.5A-5B are a series of graphs showing the % change of dry lean mass and Liver Frailty Index (LFI) of subjects on Day 15 vs. Day 1 of Period 1 (P1) and Period 2 (2) of the clinical study. A represents the amino acid composition group, and C represents the control group. Measurements are mean +/- SEM. The number of subjects in the 14.7 g TID amino acid composition to control group was 9. The number of subjects in the control to 4.9 g TID amino acid composition group was 7. § indicates that the improvement in lean mass or the liver frailty index appears to be lost once the amino acid composition was withdrawn. Ϯ indicates a relative improvement in LFI of 80% compared to the control group. DETAILED DESCRIPTION

Described herein, in part, is a composition (e.g., an Active Moiety) comprising amino acid entities and methods of improving one, two, three, or four of liver function, hyperammonemia, muscle mass, or muscle function by administering an effective amount of the composition. The composition can be administered to treat or prevent a liver disease or disorder with one or both of hyperammonemia or muscle wasting in a subject in need thereof.

Sarcopenia is a significant complication of cirrhosis and is associated with overall mortality in patients with end-stage liver disease. Limited therapies aimed at ameliorating sarcopenia in cirrhosis are available despite the fact that decreased muscle mass represents a significant risk-factor for other complications of cirrhosis, such as ascites, infection, and hepatic encephalopathy. As the liver is an important tissue for amino acid homeostasis, amino acid profiles are perturbed in patients with cirrhosis, which further exacerbates muscle wasting and cirrhosis-associated complications. The amino acid entities and relative amounts of the amino acid entities in the compositions disclosed herein have been optimized, e.g., to improve liver function, hyperammonemia, muscle function, muscle mass, and reduce complications associated with liver dysfunction (e.g., ascites, infection, or hepatic encephalopathy) in a subject that requires the coordination of many biological, cellular, and molecular processes. In some embodiments, the compositions disclosed herein improve ammonia detoxification within one or both of muscle or blood, while stimulating muscle anabolism, e.g., by improving the amino acid profile of a subject with a liver disease or disorder, such as cirrhosis.

Without being bound by any theory, it is understood that a composition of the invention can reprogram the disordered multifactorial cascade of ammonia-induced muscle wasting in liver diseases and disorders, such as cirrhosis, to improve one of more of: 1) a defective urea cycle (e.g., resulting in liver failure); 2) muscle wasting as a result of one or both of increased BCAA catabolism or deregulated mTORC1 signaling; 3) amino acid imbalance (e.g., a depletion of valine, isoleucine, and isoleucine with an enrichment of phenylalanine and tyrosine in plasma); and 4) gut ammonia production (e.g., as a result of increased glutamine transamination) (see FIG. 1). Similarly, administration of a composition of the invention can result in one, two, three or all of increase the Fischer’s ratio (e.g., the ratio of a level of BCAAs to a level of AAAs), increase the valine to phenylalanine ratio, improve body composition toward a leaner phenotype, and improve the utilization of amino acids towards muscle protein synthesis, e.g., to lower ammonia levels, in a subject.

In some embodiments, a Fischer’s ratio (e.g., the ratio of a level of BCAAs to a level of AAAs) is used to determine the plasma amino acid imbalance in a subject, e.g., to assess one or both of liver metabolism or the severity of liver dysfunction in a subject. In Example 1 described in detail below, a composition of the invention improved the Fischer’s ratio of a human subject with mild to moderate hepatic insufficiency.

An increase in a level of valine to a level of phenylanine (e.g., the valine to phenylalanine ratio) can be indicative of one or both of increased protein synthesis or a decreased level of ammonia in a subject. In Example 1 described in detail below, a composition of the invention improved the valine to phenylalanine ratio of a human subject with mild to moderate hepatic insufficiency.

In certain embodiments, a level of ammonia in the subject is negatively correated with one or both of the Fischer’s ratio or valine to phenylalanine ratio of the subject. A negative correlation between a level of ammonia and the Fischer’s ratio or the valine to phenylalanine ratio of a subject can be indicative of ammonia consumption during muscle protein synthesis. Definitions

Terms used in the claims and specification are defined as set forth below unless otherwise specified.

It must be noted that, as used in the specification and the appended claims, the singular forms“a,”“an” and“the” include plural referents unless the context clearly dictates otherwise.

As used herein, the term“amino acid entity” refers to an amino acid in one or both of free form or salt form, an amino acid residue of a peptide (e.g., of a dipeptide, tripeptide,

oligopeptide, or polypeptide), a derivative of an amino acid, a precursor of an amino acid, or a metabolite of an amino acid.

As used herein the term“XXX amino acid entity” refers to an amino acid entity that if a free amino acid, comprises free XXX or XXX in salt form; if a peptide, refers to a peptide (e.g., a dipeptide or a tripeptide) comprising an XXX residue; if a derivative, refers to a derivative of XXX; if a precursor, refers to a precursor of XXX; and if a metabolite, refers to a XXX metabolite (Table 1). Table 1. Amino acid entities include amino acids, precursors, metabolites, and derivatives of the compositions described herein.

For example, where XXX is leucine (L), then leucine amino acid entity refers to free L or L in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a L residue, a L derivative, a L precursor, or a metabolite of L; where XXX is isoleucine(I), then isoleucine amino acid entity refers to free I or I in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a I residue, a I derivative, a I precursor, or a metabolite of I; where XXX is valine (V), then valine amino acid entity refers to free V or V in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a V residue, a V derivative, a V precursor, or a metabolite of V; where XXX is ornithine (Orn), then ornithine amino acid entity refers to free Orn or Orn in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a Orn residue, a Orn derivative, a Orn precursor, or a metabolite of Orn; where XXX is aspartate (D), then aspartate amino acid entity refers to free D or D in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a D residue, a D derivative, a D precursor, or a metabolite of D; where XXX is histidine (H), then histidine amino acid entity refers to free H or H in salt form, a peptide(e.g., a dipeptide or a tripeptide) comprising a H residue, a H derivative, a H precursor, or a metabolite of H; where XXX is lysine (K), then lysine amino acid entity refers to free K or K in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a K residue, a K derivative, a K precursor, or a metabolite of K; and where XXX is threonine (T), then threonine amino acid entity refers to free T or T in salt form, a peptide (e.g., a dipeptide or a tripeptide) comprising a T residue, a T derivative, a T precursor, or a metabolite of T.

“About” and“approximately” shall generally mean an acceptable degree of error for the quantity measured given the nature or precision of the measurements. Exemplary degrees of error are within 15 percent (%), typically, within 10%, and more typically, within 5% of a given value or range of values.

An“amino acid” refers to an organic compound having an amino group (-NH2), a carboxylic acid group (-C(=O)OH), and a side chain bonded through a central carbon atom, and includes essential and non-essential amino acids, as well as natural and unnatural amino acids. Unless otherwise indicated, amino acids referred to herein are L-isomers of amino acids.

As used herein, the term“Active Moiety” means a combination of four or more amino acid entities that, in aggregate, have the ability to have a physiological effect as described herein, e.g., improving one , two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function. For example, an Active Moiety can treat a liver disease or disorder with one or both of hyperammonemia or muscle wasting. An Active Moiety of the invention can contain other biologically active ingredients. In some examples, the Active Moiety comprises a defined combination of three or more amino acid entities, as set out in detail below. In other embodiments, the Active Moiety consists of a defined combination of three or more amino acid entities, as set out in detail below.

The individual amino acid entities are present in the composition, e.g., Active Moiety, in various amounts or ratios, which can be presented as amount by weight (e.g., in grams), ratio by weight of amino acid entities to each other, amount by mole, amount by weight percent of the composition, amount by mole percent of the composition, caloric content, percent caloric contribution to the composition, etc. Generally, this disclosure will provide grams of amino acid entity in a dosage form, weight percent of an amino acid entity relative to the weight of the composition, i.e., the weight of all the amino acid entities and any other biologically active ingredient present in the composition, or in ratios. In some embodiments, the composition, e.g., Active Moiety, is provided as a pharmaceutically acceptable preparation (e.g., a pharmaceutical product).

The term“effective amount” as used herein means an amount of an active of the invention in a composition of the invention, particularly a pharmaceutical composition of the invention, which is sufficient to reduce a symptom and/or improve a condition to be treated (e.g., provide a desired clinical response). The effective amount of an active for use in a composition will vary with the particular condition being treated, the severity of the condition, the duration of treatment, the nature of concurrent therapy, the particular active being employed, the particular pharmaceutically-acceptable excipient(s) and/or carrier(s) utilized, and like factors with the knowledge and expertise of the attending physician.

An“equivalent amount” of an amino acid entity is an amount that yields, physiologically, the same activity as that amount of the corresponding free amino acid for the amino acid entity. A“pharmaceutical composition” described herein comprises at least one“Active Moiety” and a pharmaceutically acceptable carrier or excipient. In some embodiments, the

pharmaceutical composition is used as a therapeutic. Other compositions, which need not meet pharmaceutical standards (GMP; pharmaceutical grade components) can be used as a

nutraceutical, a medical food, or as a supplement, these are termed“consumer health

compositions”.

The term“pharmaceutically acceptable” as used herein, refers to amino acids, materials, excipients, compositions, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings and animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio. In a specific embodiment,“pharmaceutically acceptable” means free of detectable endotoxin or endotoxin levels are below levels acceptable in

pharmaceutical products.

In a specific embodiment,“pharmaceutically acceptable” means a standard used by the pharmaceutical industry or by agencies or entities (e.g., government or trade agencies or entities) regulating the pharmaceutical industry to ensure one or more product quality parameters are within acceptable ranges for a medicine, pharmaceutical composition, treatment, or other therapeutic. A product quality parameter can be any parameter regulated by the pharmaceutical industry or by agencies or entities, e.g., government or trade agencies or entities, including but not limited to composition; composition uniformity; dosage; dosage uniformity; presence, absence, and/or level of contaminants or impurities; and level of sterility (e.g., the presence, absence and/or level of microbes). Exemplary government regulatory agencies include: Federal Drug Administration (FDA), European Medicines Agency (EMA), SwissMedic, China Food and Drug Administration (CFDA), or Japanese Pharmaceuticals and Medical Devices Agency (PMDA).

The term“pharmaceutically acceptable excipient” refers to an ingredient in a

pharmaceutical formulation, other than an active, which is physiologically compatible. A pharmaceutically acceptable excipient can include, but is not limited to, a buffer, a sweetener, a dispersion enhancer, a flavoring agent, a bitterness masking agent, a natural coloring, an artificial coloring, a stabilizer, a solvent, or a preservative. In a specific embodiment, a pharmaceutically acceptable excipient includes one or both of citric acid or lecithin. The term“protein component,” as used herein, refers to a peptide (e.g., a polypeptide or an oligopeptide), a fragment thereof, a degraded peptide, an amino acid entity or a free amino acid. A protein component includes an amino acid in free form or salt form, a dipeptide of an amino acid, a tripeptide of an amino acid, a derivative of an amino acid, a precursor of an amino acid, or a metabolite of an amino acid. Exemplary protein components include, but are not limited to, one or more of whey protein, egg white protein, soy protein, casein, hemp protein, pea protein, brown rice protein, or a fragment or degraded peptide thereof.

The term“non-protein component,” as used herein, refers to any component of a composition other than a protein component. Exemplary non-protein components can include, but are not limited to, a saccharide (e.g., a monosaccharide (e.g., dextrose, glucose, or fructose), a disaccharide, an oligosaccharide, or a polysaccharide); a lipid (e.g., a sulfur-containing lipid (e.g., alpha-lipoic acid), a long chain triglyceride, an omega 3 fatty acid (e.g., EPA, DHA, STA, DPA, or ALA), an omega 6 fatty acid (GLA, DGLA, or LA), a medium chain triglyceride, or a medium chain fatty acid); a vitamin (e.g., vitamin A, vitamin E, vitamin C, vitamin D, vitamin B6, vitamin B12, biotin, or pantothenic acid); a mineral (zinc, selenium, iron, copper, folate, phosphorous, potassium, manganese, chromium, calcium, or magnesium); or a sterol (e.g., cholesterol).

A composition, formulation or product is“therapeutic” if it provides a desired clinical effect. A desired clinical effect can be shown by lessening the progression of a disease and/or alleviating one or more symptoms of the disease.

A“unit dose” or“unit dosage” comprises the drug product or drug products in the form in which they are marketed for use, with a specific mixture of the active and inactive components (excipients), in a particular configuration (e.g, a capsule shell, for example), and apportioned into a particular dose (e.g., in multiple stick packs).

As used herein, the terms“treat,”“treating,” or“treatment” of liver disease or disorder or muscle wasting refers to ameliorating a liver disease or disorder with one or both of

hyperammonemia or muscle wasting (e.g., slowing, arresting, or reducing the development of the liver disease or disorder with one or both of hyperammonemia or muscle wasting or at least one of the clinical symptoms thereof); alleviating or ameliorating at least one physical parameter including those which may not be discernible by the patient; and/or preventing or delaying the onset or development or progression of a liver disease or disorder with one or both of hyperammonemia or muscle wasting. Compositions comprising Amino Acid Entities

The composition of the invention as described herein (e.g., an Active Moiety) comprises amino acid entities, e.g., the amino acid entities shown in Table 1.

In certain embodiments, the leucine amino acid entity is chosen from Table 1, e.g., the leucine amino acid entity is chosen from L-leucine, β-hydroxy-β-methylbutyrate (HMB), oxo- leucine (alpha-ketoisocaproate (KIC)), isovaleryl-CoA, n-acetylleucine, or a combination thereof. In certain embodiments, the leucine amino acid entity is chosen from L-leucine, oxo- leucine (KIC), isovaleryl-CoA, n-acetyl-leucine, or a combination thereof.

In certain embodiments, the isoleucine amino acid entity is chosen from Table 1, e.g., the isoleucine amino acid entity is chosen from L-isoleucine, 2-oxo-3-methyl-valerate (alpha-keto- beta-methylvaleric acid (KMV)), threonine, methylbutyryl-CoA, D-isoleucine, N-acetyl- isoleucine, or a combination thereof.

In certain embodiments, the valine amino acid entity is chosen from Table 1, e.g., the valine amino acid entity is chosen from L-valine, 2-oxo-valerate (alpha-ketoisovalerate (KIV)), isobutyryl-CoA, N-acetyl-valine, or a combination thereof.

In certain embodiments, the ornithine amino acid entity is chosen from Table 1, e.g., the ornithine amino acid entity is chosen from L-ornithine, ornithine α-ketoglutarate, ornithine HCl, L-arginine, glycine, citrulline, or a combination thereof. In certain embodiments, the ornithine amino acid entity is chosen from L-ornithine, ornithine α-ketoglutarate, ornithine HCl, citrulline, or a combination thereof. In certain embodiments, the ornithine amino acid entity is chosen from L-ornithine, ornithine HCl, citrulline, or a combination thereof.

In certain embodiments, the aspartate amino acid entity is chosen from Table 1, e.g., the aspartate amino acid entity is chosen from L-aspartate, fumarate, adenylosuccinate, or a combination thereof.

In certain embodiments, the histidine amino acid entity is chosen from Table 1, e.g., the histidine amino acid entity is chosen from L-histidine, histidinol, histidinal, ribose-5-phosphate, carnosine, histamine, urocanate, and N-acetyl-histidine, or a combination thereof. In certain embodiments, the lysine amino acid entity is chosen from Table 1, e.g., the lysine amino acid entity is chosen from L-lysine, diaminopimelate, aspartate, trimethylhistidine amino acid entity, carnitine, saccharopine, N-acetyl-lysine, or a combination thereof.

In certain embodiments, the threonine amino acid entity is chosen from Table 1, e.g., the threonine amino acid entity is chosen from L-threonine, homoserine, O-phosphohomoserine, oxobutyrate, N-acetyl-threonine, or a combination thereof.

In some embodiments, one, two, or three of (a) a leucine amino acid entity, an isoleucine amino acid entity, or a valine amino acid entity is in free amino acid form. In some

embodiments, one, two, or three of (a) a leucine amino acid entity, an isoleucine amino acid entity, a valine amino acid entity is in salt amino acid form.

In some embodiments, one or both of (b) an ornithine amino acid entity or an aspartate amino acid entity is in free amino acid form. In some embodiments, one or both of (b) ornithine amino acid entity or an aspartate amino acid entity is in salt amino acid form (e.g., L-ornithine or a salt thereof and L-aspartate or a salt thereof are present in combination as a salt (LOLA)).

In some embodiments, one, two, or three of (c) a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity is in free amino acid form. In some embodiments, one, two, or three of (c) a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity is in salt amino acid form (e.g., L-lysine or a salt thereof is present as L-lysine acetate).

In some embodiments, at least: 35 wt. %, 40 wt. %, 42 wt. %, 45 wt. %, 50 wt. %, 55 wt. %, 60 wt. %, 70 wt. %, 80 wt. %, or more, of the total wt. of the composition (in dry form) is three, four, five, six, seven, or eight amino acid entities in (a)-(c) in free amino acid form. In some embodiments, at least: 15 wt. %, 20 wt. %, 25 wt. %, 35 wt. %, 40 wt. %, or more, of the total wt. of the composition (in dry form) is three, four, five, six, seven, or eight amino acid entities in (a)-(c) in salt form.

In some embodiments, three, four, five, six, seven, or eight amino acid entities in (a)-(c) is provided as part of a dipeptide or tripeptide, e.g., in an amount of at least: 0.01 wt. %, 0.1 wt. %, 0.5 wt. %, 1 wt. %, 5 wt. %, or 10 wt. %, or more of amino acid entities or total components of the composition.

In some embodiments, the composition further comprises L-alanine, L-arginine, L- tryptophan, carnitine, sodium acetate, or a combination thereof. In some embodiments, the composition further comprises a mineral, e.g., zinc. In some embodiments, the composition further comprises a vitamin, e.g., one, two, or three of vitamin A, vitamin D, vitamin E, or a combination thereof. In some embodiments, the composition further comprises an ammonia scavenger, e.g., phenyl acetate, acetyl-L-carnitine, citrulline, sodium benzoate, sodium phenylbutyrate, or a combination thereof.

In some embodiments, the composition can include sulfur AAs (SAAs), such as N- acetylcysteine (NAC). In an embodiment, the SAA (e.g., NAC) has anti-oxidant activity. In an embodiment, the SAA (e.g., NAC) results in decreased reactive oxygen species (ROS) or increased glutathione (GSH) in a subject administered the composition described herein.

In some embodiments, the composition comprises, consists of, or consists essentially of: a leucine amino acid entity, an isoleucine amino acid entity, valine amino acid entity , an ornithine amino acid entity, an aspartate amino acid entity, a histidine amino acid entity, a threonine amino acid entity , and a lysine amino acid entity.

In some embodiments, the composition (e.g., the Active Moiety) comprises, consists of, or consists essentially of: a) a leucine amino acid entity; b) an ornithine amino acid entity; and c) an essential amino acid (EAA)-entity chosen from a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity or a combination of two or three EAA entities; wherein at least one amino acid entity (e.g., two, three, four, or five amino acid entities) of (a)-(c) is not provided as a peptide of more than 20 amino acid residues in length.

In some embodiments, the composition (e.g., the Active Moiety) comprises, consists of, or consists essentially of: a) a leucine amino acid entity and a valine amino acid entity; b) an ornithine amino acid entity; and c) an essential amino acid (EAA)-entity chosen from a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity or a combination of two or three EAA entities; wherein at least one amino acid entity (e.g., two, three, four, or five amino acid entities) of (a)-(c) is not provided as a peptide of more than 20 amino acid residues in length. In some embodiments, the composition further comprises an isoleucine amino acid entity. In some embodiments, the composition further comprises an aspartate amino acid entity.

In some embodiments, the composition (e.g., the Active Moiety) comprises, consists of, or consists essentially of: a) a leucine amino acid entity, an isoleucine amino acid entity, and a valine amino acid entity; b) an ornithine amino acid entity; and c) an essential amino acid (EAA)-entity chosen from a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity or a combination of two or three EAA entities; wherein at least one amino acid entity (e.g., two, three, four, five, six, or seven amino acid entities) of (a)-(c) is not provided as a peptide of more than 20 amino acid residues in length. In some embodiments, the composition further comprises an aspartate amino acid entity.

In some embodiments, one, two, three, four, five, six, seven, or eight of the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, the aspartate amino acid entity, the histidine amino acid entity, the lysine amino acid entity, or the threonine amino acid entity is provided as part of a dipeptide (e.g., a homodipeptide or heterodipeptide) or salt thereof. In some embodiments, the leucine amino acid entity is Ala- Leu. In some embodiments, one, two, three, four, five, six, seven, or eight of the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, the aspartate amino acid entity, the histidine amino acid entity, the lysine amino acid entity, or the threonine amino acid entity is provided as part of a tripeptide (e.g., a

homotripeptide or heterotripeptide) or salt thereof.

In some embodiments, the composition is capable of one, two, three, four, five, six, seven, eight, nine, or all (e.g., more) of: a) increasing a level of branched chain amino acids (BCAAs); b) decreasing a level of aromatic amino acids (AAAs); c) decreasing a level of ammonia; d) increasing a level of protein, e.g., increased protein synthesis; e) increasing activation of mTORC1; f) decreasing a level of myostatin; g) decreasing a level of creatinine; h) increasing a level of albumin; i) decreasing a level of bilirubin; j) restoring a Fischer’s ratio (e.g., increasing the level of BCAAs relative to the level of AAAs); or k) increasing a level of valine relative to a level of phenylalanine.

In some embodiments the composition is capable of increasing, or increases, albumin production, e.g., by at least 50%, 60%, or 70%, as detected using an assay of albumin, e.g., in HepG2 hepatocellular carcinoma cells, e.g., using an antibody-based detection assay, e.g., an ELISA, e.g., as described in Example 9, e.g., relative to a reference composition (e.g., an amino acid composition comprising L-leucine alone; L-ornithine and L-aspartate in combination; L- histidine, L-lysine, and L threonine in combination; L-ornithine, L-aspartate, L-histidine, L- lysine, and L-threonine in combination; or L-leucine, L-isoleucine, and L-valine in combination).

In some embodiments the composition is capable of decreasing, or decreases, atrophy by at least 10%, 25%, 30%, 40%, 50%, or 60%, as detected using an assay of TNFα, e.g., in myotubes, e.g., using the MYOSCREEN ^TM platform, e.g., as described in Example 10, e.g., relative to a reference composition (e.g., an amino acid composition comprising L-histidine, L- lysine, and L-threonine in combination; L-leucine, L-isoleucine, L-valine, L-histidine, L-lysine, L-threonine, L-phenylalanine, L-methionine, and L-tryptophan in combination; L-ornithine, L- aspartate, L-histidine, L-lysine, and L-threonine in combination; L-ornithine, L-aspartate, L- leucine, L-isoleucine, L-valine, L-histidine, L-lysine, L-threonine, L-phenylalanine, L- methionine, and L-tryptophan in combination; or L-aspartate, L-leucine, L-isoleucine, L-valine, L-histidine, L-lysine, L-threonine, L-phenylalanine, L-methionine, and L-tryptophan in combination). i. Amounts

An exemplary composition (e.g., an Active Moiety) can include 0.89 g of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g of valine or the equivalent amount of a valine amino acid entity, 0.33 g of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g of threonine or the equivalent amount of a threonine amino acid entity, 0.83 g of ornithine or the equivalent amount of an ornithine amino acid entity, and 0.83 g aspartate or the equivalent amount of an aspartate amino acid entity (see, e.g., packet (g) in Table 2).

Table 2. Exemplary composition comprising amino acids (e.g., an Active Moiety).

In some embodiments, the composition includes 0.89 g +/- 20% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 20% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 20% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 20% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 20% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 20% of threonine or the equivalent amount of a threonine amino acid entity, 0.83 g+/- 20% of ornithine or the equivalent amount of an ornithine amino acid entity, and 0.83 g+/- 20% aspartate or the equivalent amount of an aspartate amino acid entity.

In some embodiments, the composition includes 0.89 g +/- 15% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 15% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 15% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 15% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 15% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 15% of threonine or the equivalent amount of a threonine amino acid entity, 0.83 g+/- 15% of ornithine or the equivalent amount of an ornithine amino acid entity, and 0.83 g+/- 15% aspartate or the equivalent amount of an aspartate amino acid entity.

In some embodiments, the composition includes 0.89 g +/- 10% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 10% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 10% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 10% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 10% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 10% of threonine or the equivalent amount of a threonine amino acid entity, 0.83 g+/- 10% of ornithine or the equivalent amount of an ornithine amino acid entity, and 0.83 g+/- 10% aspartate or the equivalent amount of an aspartate amino acid entity. In some embodiments, the composition includes 0.89 g +/- 5% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 5% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 5% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 5% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 5% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 5% of threonine or the equivalent amount of a threonine amino acid entity, 0.83 g+/- 5% of ornithine or the equivalent amount of an ornithine amino acid entity, and 0.83 g+/- 5% aspartate or the equivalent amount of an aspartate amino acid entity.

An exemplary composition (e.g., an Active Moiety) can include 0.89 g of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g of valine or the equivalent amount of a valine amino acid entity, 0.33 g of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g of threonine or the equivalent amount of a threonine amino acid entity, and 0.83 g of ornithine or the equivalent amount of an ornithine amino acid entity (see, e.g., packet (g) in Table 3).

Table 3. Exemplary composition comprising amino acids (e.g., an Active Moiety).

In some embodiments, the composition includes 0.89 g +/- 20% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 20% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 20% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 20% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 20% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 20% of threonine or the equivalent amount of a threonine amino acid entity, and 0.83 g+/- 20% of ornithine or the equivalent amount of an ornithine amino acid entity.

In some embodiments, the composition includes 0.89 g +/- 15% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 15% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 15% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 15% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 15% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 15% of threonine or the equivalent amount of a threonine amino acid entity, and 0.83 g+/- 15% of ornithine or the equivalent amount of an ornithine amino acid entity.

In some embodiments, the composition includes 0.89 g +/- 10% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 10% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 10% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 10% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 10% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 10% of threonine or the equivalent amount of a threonine amino acid entity, and 0.83 g+/- 10% of ornithine or the equivalent amount of an ornithine amino acid entity.

In some embodiments, the composition includes 0.89 g +/- 5% of leucine or the equivalent amount of a leucine amino acid entity, 0.44 g +/- 5% of isoleucine or the equivalent amount of an isoleucine amino acid entity, 0.89 g +/- 5% of valine or the equivalent amount of a valine amino acid entity, 0.33 g +/- 5% of lysine or the equivalent amount of a lysine amino acid entity, 0.33 g+/- 5% of histidine or the equivalent amount of a histidine amino acid entity, 0.33 g +/- 5% of threonine or the equivalent amount of a threonine amino acid entity, and 0.83 g+/- 5% of ornithine or the equivalent amount of an ornithine amino acid entity.

Amino Acid Composition J-1 comprises leucine, isoleucine, valine, N-acetylcysteine, histidine, lysine, and threonine as its defined amino acid components. Amino Acid Composition J-1 is free of the amino acids tyrosine, phenylalanine and glutamine. Example embodiments of these amino acid components in Amino Acid Composition J-1 are shown in Table 4 (grams per packet or unit dosage, grams per day, and weight ratio). Table 4. Amino Acid Components of Composition J-1.

Example embodiments of these amino acid components in an exemplary Amino Acid Composition are shown in Table 5 (grams per unit dosage, grams per day, and weight ratio). Table 5. Amino Acid Components of an Exemplary Composition.

ii. Ratios

In some embodiments, the wt. ratio of the BCAA entity or BCAA entities : the UCAA entity or UCAA entities : the EAA entity or EAA entities in (c) is about 20+/- 20% : 15 +/- 20%: 9+/- 20%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the BCAA entity or BCAA entities : the UCAA entity or UCAA entities : the EAA entity or EAA entities in (c) is about 20+/- 15% : 15 +/- 15%: 9+/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the BCAA entity or BCAA entities : the UCAA entity or UCAA entities : the EAA entity or EAA entities in (c) is about 10+/- 20% : 15 +/- 10%: 9+/- 10%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the BCAA entity or BCAA entities : the UCAA entity or UCAA entities : the EAA entity or EAA entities in (c) is about 20+/- 15% : 5 +/- 5%: 9+/- 5%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the EAA in (c) is about 8+/- 20% : 7.5+/- 20% : 3+/- 20% or about 8+/- 20% : 7.5+/- 20% : 4.2+/- 20%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the EAA in (c)about 8+/- 15% : 7.5+/- 15% : 3+/- 15% or about 8+/- 15% : 7.5+/- 15% : 4.2+/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the EAA in (c)is about 8+/- 10% : 7.5+/- 10% : 3+/- 10% or about 8+/- 10% : 7.5+/- 10% : 4.2+/- 10%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the EAA in (c) is about 8+/- 5% : 7.5+/- 5% : 3+/- 5% or about 8+/- 5% : 7.5+/- 5% : 4.2+/- 5%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the EAA in (c) is about 8+/- 20% : 7.5+/- 20% : 7.5+/- 20% : 3+/- 20% or about 8+/- 20% : 7.5+/- 20% : 7.5+/- 20% : 4.2+/- 20%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the EAA in (c) is about 8+/- 15% : 7.5+/- 15% : 7.5+/- 15% : 3+/- 15% or about 8+/- 15% : 7.5+/- 15% : 7.5+/- 15% : 4.2+/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the EAA in (c) is about 8+/- 10% : 7.5+/- 10% : 7.5+/- 10% : 3+/- 10% or about 8+/- 10% : 7.5+/- 10% : 7.5+/- 10% : 4.2+/- 10%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the EAA in (c) is about 8+/- 5% : 7.5+/- 5% : 7.5+/- 5% : 3+/- 5% or about 8+/- 5% : 7.5+/- 5% : 7.5+/- 5% : 4.2+/- 5%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the leucine amino acid entity : the isoleucine amino acid entity : the valine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the histidine amino acid entity : the threonine amino acid entity : the lysine amino acid entity is 8+/- 20% : 4+/- 20% : 8 +/- 20% : 7.5+/- 20% : 7.5+/- 20% : 3+/- 20% : 3+/- 20% : 3+/- 20%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the isoleucine amino acid entity : the valine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the histidine amino acid entity : the threonine amino acid entity : the lysine amino acid entity is 8+/- 15% : 4+/- 15% : 8 +/- 15% : 7.5+/- 15% : 7.5+/- 15% : 3+/- 15% : 3+/- 15% : 3+/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the leucine amino acid entity : the isoleucine amino acid entity : the valine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the histidine amino acid entity : the threonine amino acid entity : the lysine amino acid entity is 8+/- 10% : 4+/- 10% : 8 +/- 10% : 7.5+/- 10% : 7.5+/- 10% : 3+/- 10% : 3+/- 10% : 3+/- 10% . In some embodiments, the wt. ratio of the leucine amino acid entity : the isoleucine amino acid entity : the valine amino acid entity : the ornithine amino acid entity : the aspartate amino acid entity : the histidine amino acid entity : the threonine amino acid entity : the lysine amino acid entity is 8+/- 5% : 4+/- 5% : 8 +/- 5% : 7.5+/- 5% : 7.5+/- 5% : 3+/- 5% : 3+/- 5% : 3+/- 5% .

In some embodiments, the wt. ratio of:

(i) the EAA entity or EAA entities (e.g., one, two, or three of a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity) to

(ii) the BCAA entity or BCAA entities (e.g., one, two, or three of a leucine amino acid entity, an isoleucine amino acid entity, or a valine amino acid entity) in combination with the UCAA entity or UCAA entities (e.g., one or both of the ornithine amino acid entity or the aspartate amino acid entity),

is at least 1:4 +/- 15%, or at least 1:3 +/- 15%, and not more than 3:4 +/- 15%, e.g., the wt. ratio of of the EAA entity or EAA entities to the BCAA entity or BCAA entities in combination with the UCAA entity or UCAA entities is 1:2 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of:

(i) the histidine amino acid entity, the lysine amino acid entity, and the threonine amino acid entity in combination to

(ii) the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, and the aspartate amino acid entity in combination is at least 1:4 +/- 15%, or at least 1:3 +/- 15%, and not more than 3:4 +/- 15%, e.g., the wt. ratio of the histidine amino acid entity, the lysine amino acid entity, and the threonine amino acid entity in combination to the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, and the aspartate amino acid entity in combination is 1:2 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the UCAA or the combination of two of the UCAA entities to the combination of three of the BCAA entities is at least 5:20 +/- 15%, or at least 10:20 +/- 15%, and not more than 18:20 +/- 15%, e.g., the wt. ratio of the combination of two of the UCAA entities to the combination of three of the BCAA entities is 15:20 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form. In some embodiments, the wt. ratio of the combination of three of the EAA entities to the combination of three of the BCAA entities is at least 5:20 +/- 15%, or at least 7:20 +/- 15%, and not more than 15:20 +/- 15%, e.g., the wt. ratio of the combination of three of the EAA entities to the combination of three of the BCAA entities is 9:20+/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the combination of three of the EAA entities to the combination of three of the UCAA entities is at least 4:15 +/- 15%, or at least 6:15 +/- 15%, and not more than 13:15 +/- 15%, e.g., the wt. ratio of the combination of three of the EAA entities to the combination of three of the UCAA entities is 9:15 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the ornithine amino acid entity to the leucine amino acid entity is at least 3:4 +/- 15%, or at least 17:20 +/- 15%, and not more than 5:4 +/- 15%, e.g., the wt. ratio of ornithine amino acid entity to the leucine amino acid entity is 15:16 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the EAA entity in (c) to the leucine amino acid entity is at least 1:8 +/- 15%, or least 1:4 +/- 15%, and not more than 3:4 +/- 15%, e.g., the wt. ratio of the EAA entity in (c) to the leucine amino acid entity is 3:8 +/- 15% or 21:40 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the EAA entity in (c) to the ornithine amino acid entity is at least 2:15 +/- 15%, or least 4:15 +/- 15%, and not more than 2:3 +/- 15%, e.g., the wt. ratio of the EAA entity in (c) to the ornithine amino acid entity is 2:5 +/- 15% or 14:25 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the EAA entity in (c) to the leucine amino acid entity and the ornithine amino acid entity in combination is at least 2:31 +/- 15%, or least 4:31 +/- 15%, and not more than 12:31 +/- 15%, e.g., the wt. ratio of the EAA entity in (c) to the leucine amino acid entity and the ornithine amino acid entity in combination is 6:31 +/- 15% or 42:155 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the aspartate amino acid entity to the leucine amino acid entity is at least 3:4 +/- 15%, or at least 17:20 +/- 15%, and not more than 5:4 +/- 15%, e.g., the wt. ratio of aspartate amino acid entity to the leucine amino acid entity is 15:16 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the EAA in (c) to the aspartate amino acid entity is at least 2:15 +/- 15%, or least 4:15 +/- 15%, and not more than 4:5 +/- 15%, e.g., the wt. ratio of the EAA in (c) to the aspartate amino acid entity is 2:5 +/- 15% or 14:25 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the combination of two or three of the EAAs in (c) to the leucine amino acid entity and the aspartate amino acid entity in combination is at least 4:31 +/- 15%, or 6:31 +/- 15%, and not more than 24:31 +/- 15%, e.g., the wt. ratio of the combination of two or three of the EAAs in (c) to the leucine amino acid entity and the aspartate amino acid entity in combination is 12:31 +/- 15%, 72:155 +/- 15%, or 102:155 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the aspartate amino acid entity to the ornithine amino acid entity is at least 3:4 +/- 15%, or at least 4:5 +/- 15%, and not more than 2:1 +/- 15%, e.g., the wt. ratio of the aspartate amino acid entity to the leucine amino acid entity is 1:1 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the isoleucine amino acid entity to one or both of the leucine amino acid entity or the valine amino acid entity is at least 2:3+/- 15%, or at least 4:7+/- 15%, and not more than 4:5+/- 15%, e.g., the ratio of the isoleucine amino acid entity to one or both of the leucine amino acid entity or the valine amino acid entity is 1:2 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the isoleucine amino acid entity to one or both of the aspartate amino acid entity or the ornithine amino acid entity is at least 1:3+/- 15%, or at least 3:8+/- 15%, and not more than 3:5+/- 15%, e.g., the ratio of the leucine amino acid entity to one or both of the aspartate amino acid entity or the ornithine amino acid entity is 8:15 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the isoleucine amino acid entity to the combination of two or three of the EAAs in (c) is at least 1:5+/- 15%, or at least 1:4+/- 15%, and not more than 3:4+/- 15%, e.g., the ratio of the isoleucine amino acid entity to the combination of two or three of the EAAs in (c) is about 2:3 or about 5:9 or 20:51 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of the ornithine amino acid entity to the valine amino acid entity is at least 3:4+/- 15%, or at least 17:20+/- 15%, and not more than 5:4+/- 15%, e.g., the wt. ratio of ornithine amino acid entity to the valine amino acid entity is 15:16 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form.

In some embodiments, the wt. ratio of BCAAs to total amino acid entities is at least 1:4+/- 15%, or at least 1:3+/- 15%, and not more than 2:5+/- 15%, e.g., the wt. ratio of ornithine amino acid entity to the valine amino acid entity is 20:44 +/- 15%, where the ratios are determined based on an equivalent amount of each amino acid in free form. iii. Relationships of Amino Acid Entities

In some embodiments, the wt. % of one, two in combination, or three in combination of the BCAA entities is greater than the wt. % of one or two in combination of the UCAA entities, e.g., the wt. % of one, two in combination, or three in combination of the BCAA entities is at least 5% greater than the wt. % of one or two in combination of the UCAA entities; e.g., the wt. % of one, two in combination, or three in combination of the BCAA entities is at least 10%, 15%, 20%, 25%, or 30% greater than the wt. % of one or two in combination of the UCAA entities.

In some embodiments, the wt. % of one, two in combination, or three in combination of the BCAA entities is greater than the wt. % of one, two in combination, or three in combination of the EAA entities in (c); e.g., the wt. % of one, two in combination, or three in combination of the BCAA entities is at least 50% greater than the wt. % of one, two in combination, or three in combination of the EAA entities in (c); e.g., the wt. % of one, two in combination, or three in combination of the BCAA entities is at least 60%, 70%, 80%, 90%, or 100% greater than the wt. % of one, two in combination, or three in combination of the EAA entities in (c).

In some embodiments, the wt. % of one or two in combination of the UCAA entities is greater than the wt. % of one, two in combination, or three in combination of the EAA entities in (c); e.g., the wt. % of one or two in combination of the UCAA entities is at least 25% greater than the wt. % of one, two in combination, or three in combination of the EAA entities in (c); e.g., the wt. % of one or two in combination of the UCAA entities is at least 30%, 45%, 50%, 55%, or 60% greater than the wt. % of one, two in combination, or three in combination of the EAA entities in (c).

In some embodiments, the wt. % of:

(i) the BCAA entity or BCAA entities (e.g., one, two, or three of a leucine amino acid entity, an isoleucine amino acid entity, or a valine amino acid entity) in combination with the UCAA entity or UCAA entities (e.g., one or both of an ornithine amino acid entity or an aspartate amino acid entity) is greater than

(ii) the wt. % of the EAA entity or EAA entities (e.g., one, two, or three of a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity);

e.g., the wt. % of the BCAA entity or BCAA entities in combination with the UCAA entity or UCAA entities is at least 50% greater than the wt. % of the EAA entity or EAA entities; e.g., the wt. % of the BCAA entity or BCAA entities in combination with the UCAA entity or UCAA entities is at least 60%, 70%, 80%, or 90% greater than the wt. % of the EAA entity or EAA entities.

In some embodiments, the wt. % of:

(i) the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, and the aspartate amino acid entity in combination is greater than:

(ii) the wt. % of the histidine amino acid entity, the lysine amino acid entity, and the threonine amino acid entity in combination;

e.g., the wt. % of:

(i) the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, and the aspartate amino acid entity in combination is at least 50% greater than:

(ii) the wt. % of the histidine amino acid entity, the lysine amino acid entity, and the threonine amino acid entity in combination;

e.g., the wt. % of:

(i) the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, and the aspartate amino acid entity in combination is at least 60%, 70%, 80%, or 90% greater than: (ii) the wt. % of the histidine amino acid entity, the lysine amino acid entity, and the threonine amino acid entity in combination.

In some embodiments, the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is greater than the wt. % of one or both of the ornithine amino acid entity or the aspartate amino acid entity, e.g., the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is at least 2% greater than the wt. % of one or both of the ornithine amino acid entity or the aspartate amino acid entity, e.g., the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is at least 3%, 4%, 5%, or 6% greater than the wt. % of one or both of the ornithine amino acid entity or the aspartate amino acid entity.

In some embodiments, the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is greater than the wt. % of the EAA entity or the combination of two EAA entities in (c), e.g., the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is at least 10% greater than the wt. % of the EAA entity or the combination of two EAA entities in (c), e.g., the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is at least 12%, 15%, 20%, 22%, or 25% greater than the wt. % of the EAA entity or the combination of two EAA entities in (c).

In some embodiments, the wt. % of one or both of the ornithine amino acid entity and the aspartate amino acid entity is greater than the wt. % of the EAA entity or the combination of two EAA entities in (c), e.g., the wt. % of one or both of the ornithine amino acid entity and the aspartate amino acid entity is at least 4% greater than the wt. % of the EAA entity or the combination of two EAA entities in (c), e.g., the wt. % of one or both of the ornithine amino acid entity and the aspartate amino acid entity is at least 5%, 10%, 15%, 20%, or 25% greater than the wt. % of the EAA entity or the combination of two EAA entities in (c).

In some embodiments, the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity is greater than the isoleucine amino acid entity, e.g., the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity is at least 65% greater than the wt. % of the isoleucine amino acid entity, e.g., the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity is at least 70%, 75%, 80%, or 85% greater than the wt. % of the isoleucine amino acid entity. In some embodiments, the wt. % of the leucine amino acid entity or the valine amino acid entity and the ornithine amino acid entity or the aspartate amino acid entity in combination in (a) and (b) is greater than the wt. % of the EAA entity or a combination of two or three of the EAA entities in (c), e.g., the wt. % of the leucine amino acid entity or the valine amino acid entity and the ornithine amino acid entity or the aspartate amino acid entity in combination is at least 20% greater than the wt. % of the EAA entity or the combination of two or three of the EAA entities in (c), e.g., the wt. % of the leucine amino acid entity or the valine amino acid entity and the ornithine amino acid entity or the aspartate amino acid entity in combination is at least 25%, 30%, 35%, 40%, or 50% greater than the wt. % of the EAA entity, or a combination of two or three of the EAA entities in (c).

In some embodiments, the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is greater than the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity, e.g., the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is at least 2% greater than the wt. % of the aspartate amino acid entity or the ornithine amino acid entity, e.g., the wt. % of one or both of the leucine amino acid entity or the valine amino acid entity is at least 3%, 4%, 5%, or 6% greater than the wt. % of the aspartate amino acid entity or the ornithine amino acid entity.

In some embodiments, the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity is greater than the wt. % of one or two of the EAA entities in (c), e.g., the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity is at least 15% greater than the wt. % of one or two of the EAA entities in (c), e.g., the wt. % of one or both of the aspartate amino acid entity or the ornithine amino acid entity is at least 20%, 25%, 30%, or 35% greater than the wt. % of one or two of the EAA entities in (c).

In some embodiments, the wt. % of the leucine amino acid entity and the aspartate amino acid entity in combination is greater than the wt. % of the EAA, or the combination of two or three of the EAAs in (c), e.g., the wt. % of the leucine amino acid entity and the aspartate amino acid entity in combination is at least 20% greater than the wt. % of the EAA, or the combination of two or three of the EAAs in (c), e.g., the wt. % of the leucine amino acid entity and the aspartate amino acid entity in combination is at least 25%, 30%, 35%, 40%, or 50% greater than the wt. % of the EAA, or the combination of two or three of the EAAs in (c); In some embodiments, the wt. % of the leucine amino acid entity, the isoleucine amino acid entity, and the valine amino acid entity in combination is at least 20%, at least 30%, or at least 40 % of the composition, but not more than 70% of the composition. In some embodiments, the wt. % of the ornithine amino acid entity and the aspartate amino acid entity in combination is at least 15%, at least 25%, or at least 35 % of the composition, but not more than 60% of the composition.

In some embodiments, the wt. % of one or both of the leucine amino acid entity or valine amino acid entity is greater than the isoleucine amino acid entity, e.g., the wt. % of one or both of the leucine amino acid entity or valine amino acid entity is at least 25% greater than the wt. % of the isoleucine amino acid entity, e.g., the wt. % of one or both of the leucine amino acid entity orvaline amino acid entity is at least 30%, 35%, 40%, or 45% greater than the wt. % of the isoleucine amino acid entity. In some embodiments, the wt. % of the leucine amino acid entity is equal to wt. % the valine amino acid entity in the composition.

In some embodiments, the wt. % of the combination of two or three of the EAAs in (c) is greater than the isoleucine amino acid entity, e.g., the wt. % of the combination of two or three of the EAAs in (c) is at least 25% greater than the wt. % of the isoleucine amino acid entity, e.g., the wt. % of the combination of two or three of the EAAs in (c) is at least 30%, 35%, 45%, or 50% greater than the wt. % of the isoleucine amino acid entity.

In some embodiments, the BCAA entity or BCAA entities (e.g., one, two, or three of a leucine amino acid entity, an isoleucine amino acid entity, or a valine amino acid entity) in combination with the UCAA entity or UCAA entities (e.g., one or both of an ornithine amino acid entity or an aspartate amino acid entity) is present at an amount of at least 50% +/- 15%, e.g.,at least 50% +/- 15% to 66% +/- 15%, of the total wt. of amino acid entities.

In some embodiments, the EAA entity or EAA entities (e.g., one, two, or three of a histidine amino acid entity, a lysine amino acid entity, or a threonine amino acid entity) is present at an amount of at most 20% +/- 15%, e.g., at most 20% +/- 15% to 33% +/- 15%, of the total wt. of amino acid entities.

In some embodiments, the leucine amino acid entity, the isoleucine amino acid entity, the valine amino acid entity, the ornithine amino acid entity, and the aspartate amino acid entity in combination is present at an amount of at least 50% +/- 15%, e.g.,at least 50% +/- 15% to 66% +/- 15%, of the total wt. of amino acid entities. In some embodiments, the histidine amino acid entity, the lysine amino acid entity, and the threonine amino acid entity is present at an amount of at most 20% +/- 15%, e.g., at most 20% +/- 15% to 33% +/- 15%, of the total wt. of amino acid entities.

In some embodiments, one or both of the leucine amino acid entity or the valine amino acid entity is present at 10% +/- 15% to 30% +/- 15% of the total wt. of amino acid entities, e.g., 18.2 %+/- 15%. In some embodiments, the valine amino acid entity is present at 12% +/- 15% to 30% +/- 15% of the total wt. of amino acid entities, e.g., 18.2 %+/- 15%. In some embodiments, the leucine amino acid entity is present at 10% +/- 15% to 25% +/- 15% of the total wt. of amino acid entities, e.g., 18.2 %+/- 15%.

In some embodiments, the isoleucine amino acid entity is present at 5% +/- 15% to 20%+/- 15% of the total wt. of amino acid entities, e.g., 9.1 % +/- 15%. In some embodiments, one or both of the ornithine amino acid entity or the aspartate amino acid entity is each present at 10% +/- 15% to 30% +/- 15% of the total wt. of amino acid entities, e.g., 17.1 % +/- 15% (e.g., the combination of ornithine amino acid entity and the aspartate amino acid entity are present at 17.1% +/- 15% of the total wt. of amino acid entities). In some embodiments, one, two, or three of the the histidine amino acid entity, the threonine amino acid entity, or the lysine amino acid entity are each present at 2% +/- 15% to 15% +/- 15% of the total wt. of amino acid entities, e.g., 6.8% +/- 15%.

iv. Molecules to Exclude or Limit from the Composition

In some embodiments, the composition does not comprise a peptide of more than 20 amino acid residues in length (e.g., protein supplement) chosen from or derived from one, two, three, four, five, six, seven, eight, nine, 10, 11, 12, 13, 14, 15, or more (e.g., all) of egg white protein, soy protein, milk protein, casein, caseinate, hemp protein, pea protein, wheat protein, oat protein, spirulina, microprotein, lentil protein, quinoa protein, lentil protein, beef protein, or brown rice protein, or if the peptide is present, the peptide is present at less than: 10 weight (wt.) 5 wt. %, 1 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %,of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, the composition comprises a combination of 3 to 19, 3 to 18, 3 to 16, 3 to 15, or 3 to 10 different amino acid entities, e.g., the combination comprises at least: 42 wt. %, 75 wt. %, or 90 wt. % of the total wt. % of amino acid entities or total components in the composition (in dry form).

In some embodiments, dipeptides or salts thereof or tripeptides or salts thereof are present at less than: 10 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less of the total wt. of amino acid entities or total components in the composition (in dry form).

In some embodiments, at least 50%, 60%, 70%, or more of the total grams of amino acid entities or total components in the composition (in dry form) are from one, two, three, four, five, or more (e.g., all) of (a)-(c).

In some embodiments, at least: 50%, 60%, 70%, or more of the calories from amino acid entities or total components in the composition (in dry form) are from three, four, five, six, seven, or eight of the amino acid entities in (a)-(c).

In some embodiments, one, two, or three of the EAA entities is not an aromatic amino acid (AAA), or if the AAA is present in the composition, the AAA is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, the AAA is one or both of phenylalanine or tyrosine. In some embodiments, phenylalanine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, tyrosine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, glutamine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, methionine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some

embodiments, proline is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, tryptophan is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, one, two, or three of methionine, proline, or tryptophan is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, arginine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, glycine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, arginine and glycine are absent from the composition, or if present, are present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, a carbohydrate (e.g., one, two, three, four, five, six, seven, eight, nine, 10, 11, 12, 13, 14, 15, 16, 17, or 18 of dextrose, maltodextrose, sucrose, dextrin, fructose, galactose, glucose, glycogen, high fructose corn syrup, honey, inositol, invert sugar, lactose, levulose, maltose, molasses, sugarcane, or xylose) is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, a vitamin (e.g., one, two, three, four, five, six, or seven of vitamin B1, vitamin B2, vitamin B3, vitamin B6, vitamin B12, vitamin C, or vitamin D) is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments,one or both of nitrate or nitrite are absent from the composition, or if present, are present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, 4-hydroxyisoleucine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). In some embodiments, a probiotic (e.g., a Bacillus probiotic) is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, phenylacetate is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, acetyl-L-carnitine is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form).

In some embodiments, gelatin (e.g., a gelatin capsule) is absent from the composition, or if present, is present at less than: 10 wt. %, 5 wt. %, 1 wt. %, 0.5 wt. %, 0.1 wt. %, 0.05 wt. %, 0.01 wt. %, 0.001 wt. %, or less, e.g., of the total wt. of the composition (in dry form). Methods of Treatment

The disclosure provides a method for improving one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function, comprising administering to a subject in need thereof an effective amount of a composition disclosed herein (e.g., an Active Moiety). The composition can be administered according to a dosage regimen described herein to improve one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function in a subject (e.g., a human).

The disclosure provides a method for treating or preventing a liver disease or disorder with one or both of hyperammonemia or muscle wasting (e.g., cirrhosis, e.g., cirrhotic sarcopenia, End Stage Liver Disease, hepatic insufficiency, hepatic encephalopathy, or a combination thereof), comprising administering to a subject in need thereof an effective amount of a composition disclosed herein (e.g., an Active Moiety). The composition can be

administered according to a dosage regimen described herein to treat a liver disease or disorder with one or both of hyperammonemia or muscle wasting in a subject (e.g. a human).

In some embodiments, the subject has been diagnosed with a liver disease or disorder with one or both of hyperammonemia or muscle wasting (e.g., cirrhosis, e.g., cirrhotic sarcopenia, End Stage Liver Disease, hepatic insufficiency, hepatic encephalopathy, or a combination thereof). In some embodiments, the subject has not been diagnosed with a liver disease or disorder with one or both of hyperammonemia or muscle wasting. In some embodiments, the subject is a human. In some embodiments, the subject has not received prior treatment with the composition described herein (e.g., a naïve subject).

In some embodiments, the composition described herein (e.g., the Active Moiety) is for use as a medicament in improving one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function in a subject (e.g., a subject with a liver disease or disorder with one or both of hyperammonemia or muscle wasting). In some embodiments, the composition is for use as a medicament in treating (e.g., reversing, reducing, ameliorating, or preventing) a liver disease or disorder with one or both of hyperammonemia or muscle wasting in a subject.

In some embodiments, the composition described herein (e.g., the Active Moiety) is for use in the manufacture of a medicament for improving one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function in a subject (e.g., a subject with a liver disease or disorder with one or both of hyperammonemia or muscle wasting). In some embodiments, the composition (e.g., the Active Moiety) is for use in the manufacture of a medicament for treating (e.g., reversing, reducing, ameliorating, or preventing) a liver disease or disorder with one or both of hyperammonemia or muscle wasting in a subject.

In some embodiments of any of the aspects or embodiments disclosed herein, the subject has muscle wasting. In some embodiments of any of the aspects or embodiments disclosed herein, the subject has hyperammonemia.

A subject that may be treated with the composition described herein (e.g., the Active Moiety) includes a subject having cirrhosis. In some embodiments, a subject with cirrhosis has cirrhotic sarcopenia, End Stage Liver Disease, hepatic insufficiency, hepatic encephalopathy, or a combination thereof. In some embodiments, the subject has cirrhotic sarcopenia. In some embodiments, the subject has End Stage Liver Disease. In some embodiments, the subject has hepatic insufficiency. In some embodiments, the subject has hepatic encephalopathy.

In some embodiments, the subject has a metabolic symptom chosen from one, two, three, four, five, six, seven, or more (e.g., all) of increased ammonia levels (e.g., hyperammonemia), decreased levels of branched chain amino acids (BCAAs), increased levels of aromatic AAs (AAAs), hypercatabolism, decreased protein synthesis (e.g., a decreased fractional synthesis rate (FSR), e.g., in one or both of muscle or liver tissue), increased reactive oxygen species (ROS), decreased anabolism, or increased autophagy (e.g., relative to a healthy subject without a liver disease or disorder). In some embodiments, a level of one, two, or more (e.g., all) of ammonia, BCAAs, or AAs are measured in a plasma sample from the subject. In some embodiments, overnight fasting exacerbates catabolism in the subject, e.g., prior to treatment with a

composition described herein (e.g., a composition including a carbohydrate supplement). In some embodiments, the method further includes monitoring the subject for an improvement in the metabolic symptom.

In some embodiments, a level (e.g., in a plasma sample) of one, two, or more (e.g., all) of L-valine, L-leucine, or L-isoleucine is decreased in the subject, e.g., prior to treatment with a composition described herein (e.g., relative to a healthy subject without a liver disease or disorder). In an embodiment, a level of L-valine is decreased in muscle tissue of the subject prior to treatment with a composition described herein. In an embodiment, a level of L-valine is associated with mortality in the subject. In an embodiment, L-leucine is oxidized for ammonia detoxification (e.g., muscle ammonia) in the subject.

In some embodiments, a level (e.g., in a plasma sample) of one, two, or more (e.g., all) of L-histidine, L-lysine, or L-threonine is decreased in the subject, e.g., prior to treatment with a composition described herein (e.g., relative to a healthy subject without a liver disease or disorder). In some embodiments, a decreased level of one, two, or more (e.g., all) of L-histidine, L-lysine, or L-threonine results in a decrease in protein synthesis (e.g., one or both of liver or muscle protein) in the subject.

In some embodiments, a level (e.g., in a plasma sample) of one, two, three, or more (e.g., all) of tyrosine, phenylalanine, tryptophan, or glutamine is increased in the subject, e.g., prior to treatment with a composition described herein (e.g., relative to a healthy subject without a liver disease or disorder). In some embodiments, the level of one or both of tyrosine or phenylalanine is indicative of mortality in the subject. In some embodiments, the level of glutamine is increased as a result of one or both of muscle ammonia detoxification or ammoniagenesis in the subject.

In some embodiments, the subject has a physical symptom chosen from one, two, three, four, five, six, seven, eight, or more (e.g., all) of muscle atrophy, reduced myofiber area, decreased respiratory exchange, energy deficits, decreased skeletal muscle mass, decreased quality of life, increased frequency of hospitalization, decreased success of liver transplantation, or decreased survival. In some embodiments, the method further includes monitoring the subject for an improvement in the physical symptom.

In some embodiments, a functional measure is decreased in the subject (e.g., relative to a healthy subject without a liver disease or disorder). In some embodiments, one, two, three, or more (e.g., all) of a grip strength assessment measure, chair stand assessment measure, or balance assessment measure is decreased in the subject. In some embodiments, the subject has an increased Childs-Pugh score (e.g., relative to a healthy subject without a liver disease or disorder). In some embodiments, the method further includes monitoring the subject for an improvement in one or both of the functional measure or the Childs-Pugh score.

In some embodiments, the method further includes monitoring the subject for an improvement in a symptom selected from one, two, three, four, five, six, seven, eight, nine, 10, 11, 12, 13, 14, 15, 16, 17, 18, or more (e.g., all) of hyperammonemia, ascites or complications associated with ascites, variceal bleeding, infection, hepatic encephalopathy, ammonia toxicity, hepatic insufficiency, decreased urea synthesis, inflammation of hepatic tissue, fibrosis, cirrhosis, muscle wasting, muscle catabolism, muscle atrophy, hypoalbuminemia,

hypercatabolism, malnutrition, frailty, or coagulopathy. Improvement in Subjects

In some embodiments, the subject exhibits a restored plasma amino acid profile (e.g., an increased level of BCAAs and a decreased level of AAAs) after administration of the

composition. In some embodiments, the composition is capable of increasing the Fischer’s ratio (FR) (e.g., the ratio of a level of BCAAs to a level of AAAs) in a subject, e.g., a human subject with mild to moderate hepatic insufficiency. In certain embodiments, the FR of the subject is less than 4 +/- 20% prior to administration of the composition. In certain embodiments, administration of the composition, e.g., for a time period of 8 days, results in an increase of the Fischer’s ratio of the subject to a ratio of greater than 4+/- 20%, e.g., 4.5 +/- 20% or 5 +/- 20%, e.g., relative to a control subject, as described in Example 1. In certain embodiments, administration of the composition, e.g., for a time period of 8 days, results in an increase of the FR of the subject of at least 10%, e.g., at least 20%, 30%, 40%, or more, e.g., relative to a control subject, as described in Example 1. In some embodiments, the composition is capable of increasing the valine to phenylalanine ratio (VPR) in a subject, e.g., a human subject with mild to moderate hepatic insufficiency. In certain embodiments, the VPR of the subject is less than 4 +/- 20% prior to administration of the composition. In certain embodiments, administration of the composition, e.g., for a time period of 8 days, results in an increase of the VPR of the subject to a ratio of greater than 4+/- 20%, e.g., 4.5 +/- 20%, 5 +/- 20%, 5.5 +/- 20%, or 6+/- 20%, e.g., relative to a control subject, as described in Example 1. In certain embodiments, administration of the composition, e.g., for a time period of 8 days, results in an increase of the VPR of the subject of at least 20%, e.g., at least 30%, 40%, 50%, or more, e.g., relative to a control subject, as described in Example 1.

Administration of the composition can result in an improvement in body composition of a subject, e.g., the body composition of the subject is changed to a more lean phenotype (e.g., relative to a control subject). In some embodiments, the composition is capable of increasing the lean mass in a subject, e.g., a human subject with mild to moderate hepatic insufficiency. In certain embodiments, administration of the composition, e.g., for a time period of 8 days, results in an increase in the lean mass of the subject by at least 1%, e.g., at least 1.25%, 1.5%, 1.75%, or more, e.g., relative to a control subject, as described in Example 1.

Administration of the composition can result in an improvement in a Liver Frailty Index (LFI) of a subject. In some embodiments, the composition is capable of decreasing the LFI of a subject, e.g., a human subject with mild to moderate hepatic insufficiency. In certain

embodiments, administration of the composition, e.g., for a time period of 8 days, results in an decrease in the LFI of the subject by at least 50%, e.g., at least 60%, 70%, 80%, or more, e.g., relative to a control subject, as described in Example 1.

Administration of the composition can result in an improvement (e.g., an increase) in an isoleucine concentration of a subject (e.g., a subject with cirrhosis). In some embodiments, the composition is capable of increasing the isoleucine concentration (e.g., in a plasma sample) of a subject, e.g., a subject with cirrhosis. In certain embodiments, administration of the composition, e.g., for a time period of 20 days, results in an increase in the isoleucine concentration (e.g., in a plasma sample) of the subject by at least 15%, e.g., at least 20%, 25%, 30%, or more, e.g., relative to prior to administration of the composition, e.g., in a bile duct ligation model, as described in Example 2. Administration of the composition can result in an improvement (e.g., an increase) in a leucine concentration of a subject (e.g., a subject with cirrhosis). In some embodiments, the composition is capable of increasing the leucine concentration (e.g., in a plasma sample) of a subject, e.g., a subject with cirrhosis. In certain embodiments, administration of the composition, e.g., for a time period of 20 days, results in an increase in the leucine concentration (e.g., in a plasma sample) of the subject by at least 10%, e.g., at least 15%, 20%, 25%, or more, e.g., relative to prior to administration of the composition, e.g., in a bile duct ligation model, as described in Example 2.

Administration of the composition can result in an improvement (e.g., an increase) in a valine concentration of a subject (e.g., a subject with cirrhosis). In some embodiments, the composition is capable of increasing the valine concentration (e.g., in a plasma sample) of a subject, e.g., a subject with cirrhosis. In certain embodiments, administration of the composition, e.g., for a time period of 20 days, results in an increase in the valine concentration (e.g., in a plasma sample) of the subject by at least 3%, e.g., at least 5%, 7%, 10%, or more, e.g., relative to prior to administration of the composition, e.g., in a bile duct ligation model, as described in Example 2.

Administration of the composition can result in improved amino acid metabolism in a subject, e.g., a subject with cirrhosis. In some embodiments, administration of the composition comprising one or both of an ornithine amino acid entity or an aspartate amino acid entity results in improved (e.g., maintained) concentration of one, two, or three of a leucine amino acid entity, an isoleucine amino acid entity, or a valine amino acid entity in a subject, e.g., a subject with cirrhosis, e.g., in a bile duct ligation model, as described in Example 3.

Administration of the composition can result in a decreased level of tyrosine in a subject, e.g., a subject with cirrhosis. In some embodiments, an increased level of tyrosine (e.g., relative to a healthy subject without cirrhosis) is indicative of one or both of disease severity or mortality in the subject. In some embodiments, administration of the composition e.g., for a time period of 20 days, results in a decreased level of tyrosine in a subject, e.g., a subject with cirrhosis, e.g., in a bile duct ligation model, e.g., as a result of increased protein synthesis, as described in

Example 4.

Administration of the composition can result in a increased Fischer’s ratio (e.g., the ratio of leucine, valine, and isoleucine to tyrosine and phenylalanine) in a subject, e.g., a subject with cirrhosis. In some embodiments, an increased level of one or both of tyrosine or phenylalanine (e.g., relative to a healthy subject without cirrhosis) is indicative of mortality in the subject. In some embodiments, administration of the composition, e.g., for a time period of 20 days, results in an increase in the Fischer’s ratio of at least 5% +/- 15, e.g., at least 10% +/- 15, at least 20% +/- 15, or at least 22% +/- 15, e.g., relative to a subject administered a composition comprising L-leucine, L-isoleucine, and L-valine in combination; L-leucine, L-isoleucine, L-valine, L- histidine, L-lysine, and L-threonine in combination; or L-ornithine and L-aspartate in

combination, in a subject, e.g., a subject with cirrhosis, e.g., in a bile duct ligation model, as described in Example 5.

Administration of the composition e.g., for a time period of 20 days, can result in an improved level (e.g., a decreased or maintained level) of one or both of aspartate or glutamate in a subject, e.g., a subject with cirrhosis. In some embodiments, an increased level of one or both of aspartate or glutamate (e.g., relative to a healthy subject without cirrhosis) is indicative of one or both of decreased amino acid metabolism or decreased amino acid homeostasis in the subject. In some embodiments, administration of the composition e.g., for a time period of 20 days, results in a maintained level of aspartate in a subject, e.g., a subject with cirrhosis, e.g., in a bile duct ligation model, e.g., as described in Example 6. In some embodiments, administration of the composition e.g., for a time period of 20 days, results in a decreased level of glutamate in a subject, e.g., a subject with cirrhosis, e.g., in a bile duct ligation model, e.g., as described in Example 6.

In some embodiments, administration of a composition including BCAAs (e.g., one, two, or more (e.g., all) of leucine, valine, or isoleucine) to a subject results in one, two, or more (e.g., all) of stimulated protein synthesis, detoxification of ammonia (e.g., in muscle tissue), or a restored Fischer 's ratio in the subject. In some embodiments, administration of a composition including EAAs (e.g., one, two, or more (e.g., all) of histidine, lysine, and threonine) to a subject results in an increase in protein synthesis (e.g., in one or both of muscle or liver tissue) in the subject. In some embodiments, administration of a composition including UCAAs (e.g., one or two of ornithine and aspartate) to a subject results in one or both of decreased ammonia or a stimulated Urea cycle in the subject.

In some embodiments, administration of the composition results in an improvement in a symptom chosen from one, two, three, four, five, six, seven, eight, nine, 10, 11, 12, 13, 14, 15, 16, 17, 18, or more (e.g., all) of hyperammonemia, ascites or complications associated with ascites, variceal bleeding, infection, hepatic encephalopathy, ammonia toxicity, hepatic insufficiency, decreased urea synthesis, inflammation of hepatic tissue, fibrosis, cirrhosis, muscle wasting, muscle catabolism, muscle atrophy, hypoalbuminemia, hypercatabolism, malnutrition, frailty, or coagulopathy in a subject.

In some embodiments, administration of the composition promotes one or both of muscle-dependent ammonia detoxification or protein synthesis to result in one or both of decreased ammonia levels or increased muscle mass in the subject.

In some embodiments, administration of the composition results in the subject exhibiting one, two, three, or more (e.g., all) of decreased ammonia levels (e.g., hyperammonemia), increased levels of branched chain amino acids (BCAAs), decreased levels of aromatic AAs (AAAs), decreased hypercatabolism, or decreased autophagy (e.g., relative to the subject prior to administration of the composition).

In some embodiments, administration of the composition results in the subject exhibiting one, two, three, four, five, six, seven, eight, or more (e.g., all) of decreased muscle atrophy, increased myofiber area, increased respiratory exchange, increased energy, increased skeletal muscle mass, increased quality of life, decreased frequency of hospitalization, increased success of liver transplantation, or increased survival (e.g., relative to the subject prior to administration of the composition).

In some embodiments, administration of the composition results in an improvement in one or both of body weight or body composition of the subject, e.g., the body composition of the subject is changed to a more lean phenotype (e.g., relative to the subject prior to administration of the composition). In some embodiments, administration of the composition results in the subject exhibiting an increase in one, two, three, or more (e.g., all) of a grip strength assessment measure, chair stand assessment measure, or balance assessment measure (e.g., relative to the subject prior to administration of the composition). In some embodiments, administration of the composition results in the subject exhibiting an decrease in a Childs-Pugh score (e.g., relative to the subject prior to administration of the composition).

In some embodiments, administration of the composition results in the subject exhibiting one, two, three, four, five, six, seven, or more (e.g., all) of decreased ammonia levels (e.g., hyperammonemia), increased levels of BCAAs, decreased levels of AAAs, decreased catabolism, increased protein synthesis (e.g., an increased FSR, e.g., in one or both of muscle or liver tissue), decreased ROS, decreased catabolism, increased anabolism, or decreased autophagy (e.g., relative to a healthy subject without a liver disease or disorder). Dosage Regimens

The composition (e.g., the Active Moiety) can be administered according to a dosage regimen described herein to improve one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function in a subject, e.g., a subject with one or both of a liver disease or disorder or muscle wasting. In some embodiments, EAAs (e.g., one, two, or three of a histidine, histidine amino acid entity, and threonine) are included in the composition at a dose to achieve stoichiometry with the level of AAAs (e.g., one or both of tyrosine or phenylalanine) in a subject. In some embodiments, the dosing of the composition (e.g., in grams per day) results in one or both of the incorporation of free amino acids into muscle protein or increased anabolism in a subject.

The composition can be administered to a subject for a treatment period of, e.g., two weeks, three weeks, four weeks, five weeks, six weeks, seven weeks, eight weeks, nine weeks, 10 weeks, 11 weeks, 12 weeks, 13 weeks, 14 weeks, 15 weeks, 16 weeks, or longer at a dose of 5 g+/- 20% g daily to 100 g+/- 20% g daily, e.g., 10 g+/- 20% g daily to 75 g+/- 20% g daily. In some embodiments, the composition is administered at a dosage of 10 g+/- 20% g daily, 15 g+/- 20% g daily, 20 g+/- 20% g daily, 25 +/- 20% g daily, 30 +/- 20% g daily, 35 +/- 20% g daily, 40 +/- 20% g daily, 41 +/- 20% g daily, 42 +/- 20% g daily, 43 +/- 20% g daily, 44 +/- 20% g daily, 45 +/- 20% g daily, 46 +/- 20% g daily, 47 +/- 20% g daily, 48 +/- 20% g daily, 49 +/- 20% g daily, 50 +/- 20% g daily, 55 +/- 20% g daily, or 60 +/- 20% g daily. In certain embodiments, the composition is administered at a dosage of 44 +/- 20% g daily.

In some embodiments, the composition is administered with a meal. In some

embodiments, the composition is administered between meals, e.g., before or after a meal. In some embodiments, the composition is administered at least once during the day and at least once in the late evening or before bedtime.

In some embodiments, the composition can be provided to a subject (e.g., a subject with a liver disease or disorder with one or both of hyperammonemia or muscle wasting), in either a single or multiple dosage regimens. In some embodiments, doses can be administered, e.g., twice daily, three times daily, four times daily, five times daily, six times daily, seven times daily, or more. In some embodiments, the composition can be administered chronically, e.g., more than 30 days, e.g., 31 days, 40 days, 50 days, 60 days, 3 months, 6 months, 9 months, one year, two years, or three years).

In some embodiments, the composition is administered every hour, every 2 hours, every 3 hours, every 4 hours, every 5 hours, every 6 hours, every 7 hours, every 8 hours, every 9 hours, every 10 hours, every 11 hours, every 11 hours, every 12 hours, every 13 hours, every 14 hours, or every 16 hours while the patient is awake. In an embodiment, one dose of the composition is administered in the late evening.

In some embodiments, the composition comprises three stick packs, e.g., each stick pack comprising 33.3% +/- 20% of the quantity of each amino acid entity included in the composition described herein. In certain embodiments, three stick packs are administered three times daily.

In some embodiments, the composition is administered at a dose of 2 g +/- 20% to 60 g +/- 20% total amino acid entities, e.g., once daily, twice daily, three times daily, four times daily, five times daily, or six times daily (e.g., three times daily). In some embodiments, the composition is administered at a dose of 2 g +/- 20% to 10 g +/- 20%, 10 g +/- 20% to 40 g +/- 20%, or 40 g +/- 20% to 60 g +/- 20% total amino acid entities, e.g., once daily, twice daily, or three times daily (e.g., three times daily). In certain embodiments, the composition is administered at a dose of 10 g +/- 20% to 40 g +/- 20% total amino acid entities twice daily, e.g., 10 g +/- 20%, 15 g +/- 20%, 20 g +/- 20%, 25 g +/- 20%, 30 g +/- 20%, 35 g +/- 20%, or 40 g +/- 20% total amino acid entities three times daily (e.g., 15 g +/- 20%).

In some embodiments, the composition can be administered to a subject with a carbohydrate supplement, e.g., when administered in the night, late evening, or before bedtime (Table 6). In some embodiments, the composition, when administered in the late evening or before bedtime, further includes at least 50 kcal, at least 100 kcal, or at least 200 kcal of carbohydrate supplement for nocturnal dosing. In some embodiments, the carbohydrate supplement is administered at a dose of 30 g +/- 20% to 90 g +/- 20% (e.g.55 g +/- 20%) in the late evening with the composition. In some embodiments, the carbohydrate supplement can include a polysaccharide (e.g., maltodextrin (e.g., 50 +/- 20% g of maltodextrin)) and a fermentable fiber or prebiotic (e.g., one or both of beta-glucan (e.g., 2.5 +/- 20% g of beta- glucan) or resistant starch (e.g., 2.5 +/- 20% g of resistance starch)). In some embodiments, the carbohydrate supplement can be provided in a powder or liquid form and mixed with the composition for administration (e.g., at night) to a subject. In some embodiments, administration of the composition with the carbohydrate supplement supports overnight anabolic metabolism in a subject. Table 6. Exemplary carbohydrate supplement for administration with the composition.

Production of Active Moiety and Pharmaceutical Compositions

The present disclosure features a method of manufacturing or making a composition (e.g., an Active Moiety) of the foregoing invention. Amino acid entities used to make the compositions may be agglomerated, and/or instantized to aid in dispersal and/or solubilization.

The compositions may be made using amino acid entities from the following sources, or other sources may used: e.g., FUSI-BCAA™ Instantized Blend (L-Leucine, L-Isoleucine and L- Valine in 2:1:1 weight ratio), instantized L-Leucine, and other acids may be obtained from Ajinomoto Co., Inc. Pharma. grade amino acid entity raw materials may be used in the manufacture of pharmaceutical amino acid entity products. Food (or supplement) grade amino acid entity raw materials may be used in the manufacture of dietary amino acid entity products.

To produce the compositions of the instant disclosure, the following general steps may be used: the starting materials (individual amino acid entities and excipients) may be blended in a blending unit, followed by verification of blend uniformity and amino acid entity content, and filling of the blended powder into stick packs or other unit dosage form. The content of stick packs or other unit dosage forms may be dispersed in water at time of use for oral administration. When combining raw materials, e.g., pharmaceutical grade amino acid entities and/or excipients, into a composition, contaminants may be present in the composition. A composition meets a standard for level of contamination when the composition does not substantially comprise (e.g., comprises less than 10, 9, 8, 7, 6, 5, 4, 3, 2, 1, 0.1, 0.01, or 0.001% (w/w)) a contaminant. In some embodiments, a composition described in a method herein does not comprise a contaminant. Contaminants include any substance that is not deliberately present in the composition (for example, pharmaceutical grade amino acid entities and excipients, e.g., oral administration components, may be deliberately present) or any substance that has a negative effect on a product quality parameter of the composition (e.g., side effects in a subject, decreased potency, decreased stability/shelf life, discoloration, odor, bad taste, bad texture/mouthfeel, or increased segregation of components of the composition). In some embodiments, contaminants include microbes, endotoxins, metals, or a combination thereof. In some embodiments, the level of contamination, e.g., by metals, lecithin, choline, endotoxin, microbes, or other contaminants (e.g., contaminants from raw materials) of each portion of a composition is below the level permitted in food.

Excipients

The amino acid compositions of the present disclosure may be compounded or formulated with one or more excipients. Non-limiting examples of suitable excipients include a tastant, a flavorant, a buffering agent, a preservative, a stabilizer, a binder, a compaction agent, a lubricant, a dispersion enhancer, a disintegration agent, a flavoring agent, a sweetener, and a coloring agent.

In some embodiments, the excipient comprises a buffering agent. Non-limiting examples of suitable buffering agents include citric acid, sodium citrate, magnesium carbonate, magnesium bicarbonate, calcium carbonate, and calcium bicarbonate.

In some embodiments, the excipient comprises a preservative. Non-limiting examples of suitable preservatives include antioxidants, such as alpha-tocopherol and ascorbate, and antimicrobials, such as parabens, chlorobutanol, and phenol.

In some embodiments, the composition comprises a binder as an excipient. Non-limiting examples of suitable binders include starches, pregelatinized starches, gelatin,

polyvinylpyrolidone, cellulose, methylcellulose, sodium carboxymethylcellulose, ethylcellulose, polyacrylamides, polyvinyloxoazolidone, polyvinylalcohols, C12-C18 fatty acid alcohol, polyethylene glycol, polyols, saccharides, oligosaccharides, and combinations thereof.

In some embodiments, the composition comprises a lubricant as an excipient. Non- limiting examples of suitable lubricants include magnesium stearate, calcium stearate, zinc stearate, hydrogenated vegetable oils, sterotex, polyoxyethylene monostearate, talc,

polyethyleneglycol, sodium benzoate, sodium lauryl sulfate, magnesium lauryl sulfate, and light mineral oil.

In some embodiments, the composition comprises a dispersion enhancer as an excipient. Non-limiting examples of suitable dispersants include starch, alginic acid, polyvinylpyrrolidones, guar gum, kaolin, xanthan gum, bentonite, purified wood cellulose, sodium starch glycolate, isoamorphous silicate, and microcrystalline cellulose as high HLB emulsifier surfactants.

In some embodiments, the composition comprises a disintegrant as an excipient. In some embodiments, the disintegrant is a non-effervescent disintegrant. Non-limiting examples of suitable non-effervescent disintegrants include starches such as corn starch, potato starch, pregelatinized and modified starches thereof, sweeteners, clays, such as bentonite, micro- crystalline cellulose, alginates, sodium starch glycolate, gums such as agar, guar, locust bean, karaya, pecitin, and tragacanth. In some embodiments, the disintegrant is an effervescent disintegrant. Non-limiting examples of suitable effervescent disintegrants include sodium bicarbonate in combination with citric acid, and sodium bicarbonate in combination with tartaric acid.

In some embodiments, the excipient comprises a flavoring agent. Flavoring agents can be chosen from synthetic flavor oils and flavoring aromatics; natural oils; extracts from plants, leaves, flowers, and fruits; and combinations thereof. In some embodiments, the flavoring agent is selected from cinnamon oils; oil of wintergreen; peppermint oils; clover oil; hay oil; anise oil; eucalyptus; vanilla; citrus oil such as lemon oil, orange oil, grape and grapefruit oil; and fruit essences including apple, peach, pear, strawberry, raspberry, cherry, plum, pineapple, and apricot.

In some embodiments, the excipient comprises a sweetener. Non-limiting examples of suitable sweeteners include glucose (corn syrup), dextrose, invert sugar, fructose, and mixtures thereof (when not used as a carrier); saccharin and its various salts such as the sodium salt;

dipeptide sweeteners such as aspartame; dihydrochalcone compounds, glycyrrhizin; Stevia Rebaudiana (Stevioside); chloro derivatives of sucrose such as sucralose; and sugar alcohols such as sorbitol, mannitol, sylitol, and the like. Also contemplated are hydrogenated starch hydrolysates and the synthetic sweetener 3,6-dihydro-6-methyl-1,2,3-oxathiazin-4-one-2,2- dioxide, particularly the potassium salt (acesulfame-K), and sodium and calcium salts thereof.

In some embodiments, the composition comprises a coloring agent. Non-limiting examples of suitable color agents include food, drug and cosmetic colors (FD&C), drug and cosmetic colors (D&C), and external drug and cosmetic colors (Ext. D&C). The coloring agents can be used as dyes or their corresponding lakes.

Particular excipients may include one or more of: citric acid, lecithin, (e.g. Alcolec F100), sweeteners (e.g. sucralose, sucralose micronized NF, acesulfame potassium (e.g. Ace-K)), a dispersion enhancer (e.g. xanthan gum (e.g. Ticaxan Rapid-3)), flavorings (e.g. vanilla custard #4306, Nat Orange WONF #1326, lime 865.0032U, and lemon 862.2169U), a bitterness masking agent (e.g.936.2160U), and natural or artificial colorings (e.g. FD&C Yellow 6). Exemplary ingredient contents for each stick pack are shown in Table 7. Table 7. Ingredient contents in each stick pack.

In another embodiment, excipients are limited to citric acid, a sweetener (e.g., sucralose), xanthan gum, an aroma agent (e.g., vanilla custard #4036), a flavoring agent (e.g., Nat orange WONF #1362), and a coloring agent (e.g., FD&C Yellow 6), e.g.., the excipient specifically excludes lecithin (Table 8). Table 8. Exemplary contents in each stick pack.

Dietary Compositions

The composition (e.g., Active Moiety) including amino acid entities can be formulated and used as a dietary composition, e.g., chosen from a medical food, a functional food, or a supplement. In such an embodiment, the raw materials and final product should meet the standards of a food product.

The composition of any of the aspects and embodiments disclosed herein can be for use as a dietary composition, e.g., chosen from a medical food, a functional food, or a supplement. In some embodiments, the dietary composition is for use in a method, comprising administering the composition to a subject. The composition can be for use in a dietary composition for the purpose of improving one, two, three, or more (e.g., all) of liver function, hyperammonemia, muscle mass, or muscle function in a subject.

In some embodiments, the dietary composition is chosen from a medical food, a functional food, or a supplement. In some embodiments, the composition is in the form of a nutritional supplement, a dietary formulation, a functional food, a medical food, a food, or a beverage comprising a composition described herein. In some embodiments, the nutritional supplement, the dietary formulation, the functional food, the medical food, the food, or the beverage comprising a composition described herein for use in the management of a liver disease or disorder with one or both of hyperammonemia or muscle wasting (e.g., cirrhosis, e.g., cirrhotic sarcopenia, End Stage Liver Disease, hepatic insufficiency, hepatic encephalopathy, or a combination thereof) in a subject.

The present disclosure features a method of of improving one, two, three, four, five, six, seven, eight, nine, 10, 11, 12, 13, 14, 15, 16, 17, 18, or more (e.g., all) of hyperammonemia, ascites or complications associated with ascites, variceal bleeding, infection, hepatic

encephalopathy, ammonia toxicity, hepatic insufficiency, decreased urea synthesis, inflammation of hepatic tissue, fibrosis, cirrhosis, muscle wasting, muscle catabolism, muscle atrophy, hypoalbuminemia, hypercatabolism, malnutrition, frailty, or coagulopathy, comprising administering to a subject an effective amount of a dietary composition described herein.

The present disclosure features a method of providing nutritional support or

supplementation to a subject with a liver disease or disorder with one or both of

hyperammonemia or muscle wasting, comprising administering to the subject an effective amount of a composition described herein.

The present disclosure features a method of providing nutritional support or

supplementation that aids in the management of a liver disease or disorder with one or both of hyperammonemia or muscle wasting, comprising administering to a subject in need thereof an effective amount of a composition described herein.

In some embodiments, the subject has cirrhosis.

In some embodiments, the subject has cirrhotic sarcopenia. In some embodiments, the subject has hepatic insufficiency. In some embodiments, the subject has End Stage Liver Disease. In some embodiments, the subject has hepatic encephalopathy. The compositions can be used in methods of dietary management of a subject (e.g., a subject without a liver disease or disorder with one or both of hyperammonemia or muscle wasting). In some embodiments, the subject does not have a liver disease or disorder with one or both of hyperammonemia or muscle wasting. Biomarkers

Any of the methods disclosed herein can include evaluating or monitoring the

effectiveness of administering a composition including amino acid entities to a subject, e.g., a subject having a liver disease or disorder with one or both of hyperammonemia or muscle wasting (e.g., cirrhosis, e.g., cirrhotic sarcopenia, End Stage Liver Disease, hepatic insufficiency, hepatic encephalopathy, or a combination thereof).

In embodiments, the value of effectiveness to the composition in treating a subject comprises a measure of one, two, three, four, five, six, seven, eight, nine, 10, 11, or more (e.g., all) of the following: a) the ratio of BCAAs to AAAs (e.g., the Fischer’s ratio), b) a level of ammonia, c) a level of valine relative to a level of phenylalanine, d) a level of albumin (e.g. meal-induced albumin), e) a level of myostatin, f) a level or activity of mTOR, g) a level of creatinine, h) a level of bilirubin, i) a level of urinary 3-methylhistidine, j) a level of AMPK, k) a level of Gcn2, or l) a level of protein synthesis.

In some embodiments of any of the methods disclosed herein, the measure of one or more of a)-l) is obtained from a sample acquired from the subject. In some embodiments, the sample is chosen from a blood sample (e.g., a plasma sample), a liver sample, or a muscle sample.

In some embodiments, the subject is evaluated prior to receiving, during, or after receiving, a composition including defined amino acid components.

In some embodiments, the level of BCAAs and AAAs are determined using a Fischer’s Ratio.

In some embodiments, administration of the composition results in one, two, three, four, five, six, seven, eight, nine, 10, 11, or more (e.g., all) of: a) increased level of BCAAs to AAAs (e.g., increased Fischer’s ratio), b) decreased level of ammonia, c) an increased level of valine relative to a level of phenylalanine, d) an increased level of albumin (e.g. meal-induced albumin), e) a decreased level of myostatin, f) an increased level or activity of mTOR, g) a decreased level of creatinine, h) a decreased level of bilirubin, i) a decreased level of urinary 3- methylhistidine, j) a decreased level of AMPK, k) a decreased level of Gcn2, or l) an increased level of protein synthesis.

In some embodiments, administration of the composition results in an increase in amino acid entities (e.g., one, two, there, four, five, or six of L-valine, L-leucine, L-isoleucine, L- histidine, L-lysine, or L-threonine) in one, two, or more (e.g., all) of blood, plasma, or serum of the subject, e.g., in a blood, plasma, or serum sample from the subject.

In some embodiments, administration of the composition results in an improvement in one, two, three, four, five, six, seven, eight, nine, 10, 11, or more (e.g., all) of a)-l) after a treatment period of 24 hours (e.g., after 48 hours or 72 hours). EXAMPLES

The Examples below are set forth to aid in the understanding of the inventions, but are not intended to, and should not be construed to, limit its scope in any way. Example 1: Treatment of Hepatic Insufficiency Subjects with an Amino Acid Composition.

The study described herein features the administration of a composition including amino acids to subjects with mild to moderate hepatic insufficiency. The goal of this pre-IND and IRB approved study was to determine the safety and tolerability of an amino acid composition as well as its impact on the structure and function of human physiology by looking at various markers of amino acid metabolism, liver function/health, and ammonia detoxification, after 7 days and 14 days of administration. The composition included about 0.8889 g of L-leucine, about 0.4444 g of L-isoleucine, about 0.8889 g of L-valine, about 0.4703 g of L-lysine acetate (or about 0.3333 g of L-lysine), about 0.3333 g of L-histidine, about 0.3333 g of L-threonine, and about 1.6667 g of L-ornithine L-aspartate per stick packet, for administration in three stick packs three times per day (e.g., a total of about 44.1 g per day, or about 14.7 g three times per day). The total amounts (in grams) of the amino acids in the composition per stick pack are shown in Table 9. Table 9. Components of the amino acid composition in grams (g) per individual stick pack.

In this study, subjects received the amino acid composition three times daily for 14 days. Amino acids were provided in powder form to be dissolved in 8 oz. of water. Participants were given the amino acid composition for the 14 day study period.

The study described herein included Part 1 and 2 (FIG.2). The purpose of Part 1 was to determine how subjects with mild to moderate hepatic insufficiency responded to a standard protein meal, e.g., with respect to endogenous amino acid levels. As part of the intended safety evaluation, plasma ammonia levels were assessed in response to this protein meal. After an overnight fast, vital signs, body weight/composition, hand grip strength, chair stand, and balance assessment of subject were measured, followed by a baseline blood draw, prior to administration of a standardized protein shake containing 35g of protein. For 5 hours following the protein meal, blood samples were collected at specified time points to measure ammonia and plasma amino acids.

Part 2 featured a 2-period crossover design for two different amounts of the amino acid composition (dosed over 15 days per period) with natural history as control. During Part 2, subjects were administered the amino acid composition three times daily at two different amounts (14.7 g TID during Period 1 and 4.9 TID during Period 2 for 14 days each) (FIG.2). Each administration was composed of 3 stick packs of the amino acid composition mixed into 8 oz. of water (by mixing or shaking for at least 30 sec before consumption), and administered orally three times per day, approximately one hour after breakfast, one hour after lunch, and one hour after dinner. During Period 2, each administration was composed of 1 stick pack of the amino acid composition mixed into 4 oz. of water (by mixing or shaking for at least 30 sec before consumption), and administered orally three times per day, approximately one hour after breakfast, one hour after lunch, and one hour after dinner.

In Period 1, the subjects from Part 1 were split into two groups: one group received 14.7 g of the amino acid composition administered TID plus a standardized bedtime snack (one LARABAR ^® ) for 14 days. The second group received the standardized bedtime snack without the amino acid composition for 14 days. Following a washout of up to 14 days, subjects that received 14.7 g of the amino acid composition TID in Period 1 received only the standard bedtime snack in Period 2 and subjects that received the bedtime snack only in Period 1 received 4.9 g of the amino acid composition TID plus the standardized bedtime snack in Period 2. Body weight/composition, hand grip strength, plasma amino acid levels, serum total protein, albumin, total alpha-amino nitrogen, and urinary urea and alpha-amino nitrogen were determined.

The primary outcome measure of this study was safety and tolerability. The secondary outcome measures were to examine the impact on human physiology through biomarkers that pertain to amino acid metabolism and liver function. Assessments were performed at baseline (day 1), at day 8, and at day 15 of the study. Amino acid levels in plasma and ammonia levels in serum were measured using standard analytical methods in a clinical laboratory.

Dry lean mass was determined at day 1 and day 15. Body composition including dry lean mass was measured using the InBody 770 system, which measures intracellular and extracellular body water, lean, fat, and muscle mass.

Components of the liver frailty index (hand grip strength, chair stands, and balance) were measured at day 1 and day 15. Measures of full handgrip strength were taken using a calibrated hand dynamometer (Jamar). Subjects used their dominant hand to squeeze the dynamometer, then released, and repeated the test three times. The chair stand assessment measured the time that it took a subject to stand up and sit down in a chair 5 times without using their arms.

Balance was tested in 3 positions for 10 seconds in each position. For each position, a stop watch was started when the subject’s feet were in the correct pose and the subject let go of any support. Results

In Period 1, subjects administered 14.7 g of the amino acid composition TID

demonstrated a robust 40-50% increase in the Fischer’s ratio (FR) and valine:phenylalanine ratio (VPR) by Day 8 and these levels were maintained on Day 15 as compared to control group (FIG. 3A-3B). When the amino acid composition was washed out for 14 days, Fischer’s ratio and VPR ratio levels retuned to baseline. Following the washout, in period 2, when the same subjects in period 1 that were administered 14.7 g of the amino acid composition were crossed over to control, the increase in Fischer’s ratio and VPR ratio was not observed. Subjects that were in the control group in Period 1, when crossed over to 4.9 g of the amino acid composition TID in Period 2 demonstrated minimal to no increase in Fischer’s ratio or valine:phenylalanine ratio relative to the higher dose of the amino acid composition group. There was a strong negative correlation between ammonia and the FR or the VPR on Day 15 for the group administered 14.7 g of the amino acid composition, which suggests ammonia consumption during muscle protein synthesis (FIG.4A and 4B).

In Period 1, subjects administered 14.7 g of the amino acid composition TID

demonstrated a robust 2% change in dry lean mass and 80% relative improvement in the Liver Frailty Index (LFI) at Day 15 relative to control group (FIG.5A-5B). Following the washout, in period 2, when the same subjects in period 1 that were administered 14.7 g of the amino acid composition were crossed over to control, the increase in dry lean mass and decrease in the LFI was not observed. Thus, the improvement in lean mass and LFI appeared to be lost once administration of amino acid composition was withdrawn. Subjects that were in the control group in Period 1, when crossed over to 4.9 g of the amino acid composition TID in Period 2, demonstrated minimal to no increase in dry lean mass and minimal to no decrease in the LFI relative to the higher dose of the amino acid composition group.

Together these findings demonstrate a robust pharmacological effect of the amino acid composition on these parameters, and suggest that the amino acid composition has a favorable safety and tolerability profile and impacts biomarkers for the structure and function of the human body that relate to amino acid metabolism, improved liver function/health, and improved ammonia detoxification. Example 2: ODLIVHKT improves basal BCAA concentrations.

Basal plasma concentrations of branched chain amino acids are measured in animals treated with ODLIVHKT or comparative constituents on day 1 and day 20 of treatment. Rationale: Branched chain amino acids are depleted in plasma of patients with liver cirrhosis and low levels correlate with survival in end stage liver disease. BCAA depletion occurs because catabolism to glutamate for intramuscular ammonia detox is a consequence of failed nitrogen handling resulting from failed liver. Branched chain amino acids improve albumin in hypoalbuminemic cirrhotic individuals but have not been efficacious in other aspects of pathophysiology of cirrhosis. Valine levels are the most highly correlated with mortality in cirrhosis (Kinny-Koster 2015).

Methods: 8-week old Sprague-Dawley rats are subjected to bile duct ligation (BDL), a well-established model of cholestasis-induced liver cirrhosis. Three weeks post-bile duct ligation, the animals were hyperammonemic and displayed perturbed plasma amino acid profiles, and treatment with ODLIVHKT or constituent treatment groups (see Table 10 for treatment groups) was commenced by BID oral administration for 20 days. On Day 1 and Day 20 of the study animals were fed ad libitum overnight, food was removed 1 hour prior to administration of the amino acid compositions and blood was sampled at that time. Amino acid concentrations were measured from flash-frozen heparinized plasma samples.

Results: ODLIVHKT treatment resulted in an increase in basal BCAA levels on day 20 compared to day 1 while other treatment groups caused a worsening or no change (Table 11). Vehicle treated animals showed considerable reductions in the basal levels of Leucine,

Isoleucine and Valine (all p values < 0.1) on day 20 compared to day 1. Isoleucine levels significantly worsened over the treatment period for animals treated with LIV and LIVHKT, OD treated animals showed slight improvement, and ODLIVHKT treated animals showed the biggest increase in isoleucine concentrations. Leucine levels were significantly decreased on day 20 compared to day 1 for LIV and LIVHKT treated animals. OD treated animals showed no change in leucine concentrations, while ODLIVHKT animals showed increased basal levels that trend toward significance. Valine levels are significantly decreased on day 20 in LIV and LIVHKT treated animals compared to day 1 and OD treated animals decrease though no significantly. ODLIVHKT is the only treatment group that shows increases in basal valine levels on day 20 compared to day 1.

Example 3: Amino acid composition influences pharmacokinetic properties of

administered amino acids and extended treatment results in improved amino acid metabolism.

Pharmacokinetic properties (maximum concentration, CMAX) of ODLIVHKT or constituent compositions were measured on Day1 and Day20.

Relevance: The balance between amino acid catabolism and protein synthesis is disrupted in cirrhotic individuals (Muller et al., 1999; Tessari et al., 2003). Responses to anabolic stimuli are diminished compared to healthy animals but how metabolism of specific amino acids is affected based on context of dosed amino acids is not known or appreciated (Tsien et al., 2015). Although LIV and LIVHKT were unable to prevent worsening of BCAA basal levels,

ODLIVHKT treatment was able to increase levels in response to treatment (Example 2), but how BCAA metabolism is affected by LIV containing compositions is unknown.

Methods: 8-week old Sprague-Dawley rats were subjected to bile duct ligation (BDL), a well-established model of cholestasis-induced liver cirrhosis. Three weeks post-bile duct ligation, the animals were hyperammonemic and displayed perturbed plasma amino acid profiles, and treatment with ODLIVHKT or constituent treatment groups (see Table 10 for treatment groups) was commenced by BID oral administration for 20 days. On Day 1 and Day 20 of the study animals were fed ad libitum overnight, food was removed 1 hour prior to administration of the amino acid compositions and blood was sampled at that time. Blood was collected again prior to administration of the amino acid compositions and 0.25, 0.5, 1, 2, 3, and 4 hour thereafter. Basal amino acid concentrations were assessed from flash-frozen heparinized plasma samples using LC-MS based methodology. Maximum concentrations of LIV are measured over the 4 hour time course.

Results: Maximum concentration of LIV in response to amino acid administration declined on Day 20 compared to Day 1 in vehicle, LIV, and LIVHKT treated animals. OD administration maintained, or prevented the decrease in, LIV CMAX on day 20 compared to Day 1. ODLIVHT causes an increase in CMAX on day 20, the only treatment group that improves response to amino acid administration. Importantly, the highest CMAX observed was on day 20 in the ODLIVHKT treatment group (Table 12).

Example 4: Amino acid composition reduces tyrosine exposure which is associated with disease severity effects on basal AA profiles of cirrhotic animals and concentrations of plasma amino acids associated with and mortality in liver cirrhosis. Disposal of Tyrosine, which is associated with decreased liver function and mortality in liver disease was measured in response to treatment with ODLIVHKT or constituent treatment groups.

Relevance: Patients with end-stage liver disease have plasma amino acid concentrations that correlate with disease severity and survival in liver cirrhosis (Kinny-Koster et al., 2016). Aromatic amino acids are elevated in liver patients and correlate with overall mortality and have been predicted to promote hepatic encephalopathy (Soeters and Fischer et al., 1976). Tyrosine tolerance is disrupted in liver disease, and patients take longer to return to fasting levels with tyrosine ingestion (Levine and Conn, 1969).

Methods: 8-week old Sprague-Dawley rats were subjected to bile duct ligation (BDL), a well-established model of cholestasis-induced liver cirrhosis. Three weeks post-bile duct ligation, the animals were hyperammonemic and displayed perturbed plasma amino acid profiles, and treatment with ODLIVHKT or constituent treatment groups (see Table 10 for treatment groups) was commenced by BID oral administration for 20 days. On Day 1 and Day 20 of the study, animals were fed ad libitum overnight, food was removed 1 hour prior to administration of the amino acid compositions and blood was sampled at that time. Blood was collected again prior to administration of the amino acid compositions and 0.25, 0.5, 1, 2, 3, and 4 hour thereafter. Basal amino acid concentrations were assessed from flash-frozen heparinized plasma samples using LC-MS based methodology. Total exposure of amino acids was measured by subtracting baseline concentrations from each timepoint and then calculating the area under the curve (AUC) of the amino acid concentration during the four hour time course.

Results: Endogenous tyrosine levels were decreased with amino acid treatments as indicated by AUC values calculated over the time course (Table 13). On Day 1, all amino acid compositions decrease Tyrosine exposure at somewhat equivalent levels, LIVHKT had the greatest effect and vehicle administration had no effect. The highest clearance of tyrosine for the LIVHKT treated animals on day 1 is consistent with increased utilization for protein synthesis compared to the LIV composition, and suggests that addition of other essential amino acids may not be necessary. Interestingly, the ability of amino acid to decrease Tyrosine exposure became compromised over the 20 day treatment period, consistent with disease progression and worsened liver function. However, ODLIVHKT treatment group was the only group that showed an improvement compared to day 1, in other words the effect on decreasing tyrosine exposure with ODLIVHKT administration was better on Day 20 compared to Day 1 indicating that the treatment period had improved amino acid handling and metabolism. This is contrast to LIV, LIVHKT, and OD all of which had worsened handling of Tyrosine on Day 20 compared to Day 1. Moreover, ODLIVHKT trends toward significance when compared to vehicle treated groups while the other treatment groups showed no difference.

Example 5: Amino acid composition improves Fischer’s Ratio in cirrhosis.

Fischer’s Ratio, the ratio of LIV to FY, is measured in response to treatment with

ODLIVHKT or constituent treatment groups (Table 10)

Relevance: Patients with liver cirrhosis have altered plasma amino acid profiles owing to the disrupted and perturbed amino acid metabolism that results from liver failure. BCAAs L, I, and V, are highly depleted in liver cirrhosis and predictive of mortality. On the other hand, aromatic amino acids F and Y are enriched in liver patients and also predict mortality. A low Fischer’s ratio is strong correlated with decreased survival of liver patients

Methods: 8-week old Sprague-Dawley rats were subjected to bile duct ligation (BDL), a well-established model of cholestasis-induced liver cirrhosis. Three weeks post-bile duct ligation, the animals were hyperammonemic and displayed perturbed plasma amino acid profiles, and treatment with ODLIVHKT or constituent treatment groups (see Table 10 for treatment groups) was commenced by BID oral administration for 20 days. On Day 1 and Day 20 of the study, animals were fed ad libitum overnight, food was removed 1 hour prior to administration of the amino acid compositions and blood was sampled at that time. Amino acid concentrations were measured from flash-frozen heparinized plasma samples.

Results: Over the treatment period, LIV and LIVHKT treated animals had a greater than 25% worsening of their Fischer’s ratio score. OD treated animals worsened by 5%.

ODLIVHKT treated animals were the only group that showed an improved Fischer’s Ratio in response to amino acid treatment which is surprising because all the constituent treatments worsened over the treatment period. ODLIVHKT treated animals had a greater than 20% improvement in their Fischer’s Ratio (Table 14).

Example 6: Amino acid composition unexpectedly influences non-essential amino acid (NEAA) metabolism of both dosed (Aspartate) and non-dosed (Glutamate) amino acids with acute and prolonged treatment, suggesting different pharmacodynamic properties.

Plasma concentrations of NEAAs (Aspartate and Glutamate) were measured in response to ODLIVHKT treatment and constituent comparators.

Relevance: Patients with liver cirrhosis have disrupted amino acid homeostasis and deregulated response to amino acid ingestion. Protein ingestion results in elevated ammonia production in cirrhosis due to hypercatabolism and anabolic resistance. Aspartate is an NEAA in the urea cycle important for nitrogen donation in urea production. Glutamate which is generated for Leucine, Isoleucine, Valine, and Aspartate, is an ammonia acceptor in skeletal muscle in a reaction producing glutamine. Aspartate and glutamate are formed from different essential amino acids and their concentrations indicate metabolic state of patients with liver disease.

Methods: 8-week old Sprague-Dawley rats were subjected to bile duct ligation (BDL), a well-established model of cholestasis-induced liver cirrhosis. Three weeks post bile duct ligation, the animals were hyperammonemic and displayed perturbed plasma amino acid profiles. Ad libitum fed animals were treated BID with ODLIVHKT or constituent treatment groups by oral gavage for 20 days and PK properties on Day 1 and Day 20 were assessed by measuring concentrations of NEAAs from flash-frozen heparinized plasma collected over a 5 hour treatment time course using LC-MS technology. CMAX is calculated as in Example 3.

Results: On Day 1, Vehicle treatment had no effect on CMAX of Aspartate relative to basal concentrations (20uM, data not shown). LIV and LIVHKT resulted in a significant drop in Aspartate levels compared to vehicle. OD induced an increase in Aspartate to the highest concentration of all groups measured on Day 1, which is interesting because ODLIVHKT induces a smaller CMAX despite an equivalent amount of Aspartate being administered. On Day 20, the ability LIV or LIVHKT to cause a depletion in Aspartate was no longer observed. OD treatment resulted in a two-fold increase in CMAX compared to Day 1. Surprisingly,

ODLIVHKT did not alter basal levels of Aspartate and the effect on CMAX was not changed compared to Day 1 (Table 15). Glutamate levels were not significantly influenced by vehicle, LIV, or LIVHKT on Day 1 or Day 20 but treatment with OD or ODLIVHKT significantly induced Glutamate CMAX. Surprisingly, the effect of 20 days of treatment resulted in a lowering of Glutamate CMAX in ODLIVHKT treatment group compared to Day 1, although treatment with OD alone continued to induce a significant amount glutamate. Taken together, the aspartate and glutamate levels induced by amino acid treatment suggest that amino acid metabolism and homeostasis had been considerably changed in the ODLIVHKT treatment group (Table 15).

Example 7: Amino acid composition effects on cirrhosis-induced hyperammonemia despite nitrogen load provided.

Basal ammonia levels in animals treated with ODLIVHKT relative to other treatments, basal level differential day 1 to day 20 (ad libitum) and stable basal fasted levels at day 14 (fasted) will be measured.

Relevance: High protein diets are recommended for patients with liver cirrhosis, but protein ingestion results in increased plasma amino acid concentrations (Loza, 2014). Cirrhosis and portal hypertension result in increased plasma ammonia which both accelerate muscle wasting and induce hepatic encephalopathy (Dam et al., 2013). Lowering plasma ammonia levels has been a foundational strategy in the treatment and management of cirrhosis associated complications.

Methods: 8-week old Sprague-Dawley rats will be subjected to bile duct ligation (BDL), a well-established model of cholestasis-induced liver cirrhosis. Three weeks post bile duct ligation, the animals will be hyperammonemic and will display perturbed plasma amino acid profiles, and treatment with ODLIVHKT or constituent treatment groups (see Table 10) will be commenced by twice daily oral administration for 20 days. Flash-frozen heparinized plasma will be collected on Day 1 (ad libitum fed), Day 14 (fasted) and Day 20 (ad libitum fed) and ammonia will be measured according to manufacturer’s instructions using a plate based assay (Abcam catalogue number Ab83360).

Ammonia concentrations in ODLIVHKT treated animals compared to constituent treatments will be measured. Example 8: Additional Bile Duct Ligation Experiments (generic description of BDL protocol and measures).

Bile duct ligated rats will be used to model effects of amino acid compositions on pharmacokinetic and pharmacodynamic properties, including but not limited to markers of amino acid homeostasis, disease pathophysiology, disease histology, and functional consequences, in animals with liver cirrhosis.

Relevance: End-stage liver disease results in a complex pathophysiology arising from liver failure that has systemic consequences across all organs. As the liver is a critical organ for maintaining amino acid homeostasis, liver failure has profound dysregulation of plasma amino acid concentrations which are associated with disease severity and mortality. As the largest reservoir of protein in the body, skeletal muscle is a critical source of amino acids and profound wasting is observed in patients with liver source and skeletal muscle mass predicts mortality in cirrhotic patients. Bile duct ligation is a well-accepted model of cholestasis-induced liver disease that manifests with hyperammonemia and dysregulation of plasma amino acids. Muscle mass and function worsen over time in the BDL rat. As such, the BDL rat is a useful pre-clinical model to understand the complex pathophysiology arising from liver failure and examine consequences of various interventions on multi-systemic effects and markers of disease

Methods: 6-week old rats will be subjected to a surgical procedure where a section of the bile duct is isolated, ligated, and cauterized. Starting one to two weeks post-surgery, the animals will be treated twice daily by oral gavage with amino acid compositions (e.g. amino acid composition treatments as in Table 10 and/or Table 16) for one month.

Pharmacokinetic properties of the amino acid compositions will be assessed in both the fed and fasted state at the beginning, middle, and end of the treatment period. Pharmacokinetic analysis will be performed by collecting blood from the jugular vein in heparin tubes prior to and 0.25hr, 0.5hr, 1hr, 1.5hr, 2hr, 3hr, and 4hr after administration of the amino acid composition. Plasma amino acid concentrations will be assessed by LC-MS or an equivalent method. In addition, plasma will be analyzed for ammonia levels, cytokine and chemokine levels (e.g., TNF, IL-6, etc.), markers of liver damage (e.g. ALT, AST), and protein (e.g. Total, albumin, etc).

Muscle function will be measured by assessing forelimb and hindlimb grip strength using a standard meter and testing at the beginning, middle, and end of the treatment period. At the end of the study, hindlimb muscles will be collected, weighed, and embedded in OCT freezing medium. Thin cryosections will be prepared and immunostained or stained with hematoxylin and eosin (H&E), and muscle mass will be assessed by quantifying the cross-sectional area of myofibers of each muscle in the section.

Effects on liver function will be assessed by collecting the entire liver at the end of the study, weighing it, and preparing it for paraffin embedding by fixing specific lobes in 10% formalin overnight. H&E staining, staining for fibrosis (Sirius Red), Inflammation, and other standard measures and routine assessments will be made.

Effects on amino acid homeostasis will be assessed using targeted metabolite profiling and untargeted metabolomics of plasma, liver and muscle. Plasma collections at the beginning, middle, and end of the study will serve to measure disease progression and tissue analysis will be used to determine further consequences of treatment with various amino acid compositions. Example 9: Amino acid composition effects on hepatic albumin production in cirrhosis- induced hypoalbuminemia.

Media composed of amino acids consistent with profiles of cirrhotic individuals was tested for effect on production of albumin. Effects of ODLIVHKT, components and comparator compositions on albumin production were determined.

Relevance: Plasma amino acid concentrations are disrupted in patients with liver cirrhosis and predict mortality in end stage liver disease (Kinny-Koster et al., 2016). Plasma albumin levels are an important metric in Child’s-Pugh scoring of liver disease severity and malnutrition which results in hypoalbuminemia is a significant complication of liver cirrhosis (Loza, 2014). BCAAs (specifically LIVact) has been approved outside the United States for the treatment of hypoalbuminemia in liver cirrhosis.

Methods: The ability of ODLIVHKT to increase hepatocyte albumin production was assessed using the C3A derivative clone of the HepG2 Hepatocellular Carcinoma cell line (ATCC, CRL-10741).2.0e4 cells per well were seeded on day 0 in a 96-well microplate

(Corning; 3903) in Dulbecco’s Modified Eagle Medium (DMEM, Corning) supplemented with 10% fetal bovine serum (Corning) and 0.2% Primocin (InVivoGen, San Diego, CA) and incubated for 24 hours at 37°C, 5% CO2. On day 1, the cell medium was replaced with amino acid free DMEM (US Biologicals, Salem, MA) supplemented with 0.1% heat inactivated fetal bovine serum (HI-FBS, HyClone), 100 ug/mL Primocin (InVivoGen), amino acids supplemented at 0.5X concentrations relative to plasma levels consistent with rations observed in cirrhotic individuals (Kakazu et al., 2013) and a dose curve of defined amino acid compositions at 5X, 10X, 20X and 40X of basal media concentrations was added to the cells (see Table 16). Cells were cultured for 48 hours at 37°C, 5% CO ₂ , media was collected, cells were washed 1x in PBS, fixed in 4% paraformaldehyde, washed 2x in PBS, nuclei were stained with Hoechst 33342 according to manufacturer’s instructions (Life Technologies, H3570) and then washed 2x in PBS. Media albumin levels were assessed by R&D Systems’s DuoSet ELISA Development System for Human Serum Albumin (R&D Systems, DY1455) and nuclei were counted using Molecular Devices Image Express High Content Screening platform and pre-installed nuclei counting analysis pipeline. Albumin levels were normalized to total nuclei in order to derive a per cell albumin production ratio.

Albumin production was determined in ODLIVHKT, constituent and comparator treated cells.Results: The composition comprising ODLIVHKT had significant albumin promoting activity in the context of cirrhosis-induced hypoalbuminemia in vitro. This is a surprising observation in the context that OD and HKT had mild inhibitory activity, while ODHKT was a potent inhibitor of albumin production. However, when combined together ODLIVHKT had more potent and significant albumin producing activity than the LIV combination alone.

Example 10: OLIV ameliorates TNF-induced defects in myoblast fusion.

Relevance: Patients with liver cirrhosis and concomitant muscle wasting (Cirrhotic Sarcopenia, CS) are especially susceptible to co-morbidities and complications associated with end stage liver disease. Muscle wasting in cirrhosis is multifactorial and complex but driven by inflammation, altered plasma amino acid availability, hyperammonemia, and myostatin expression. TNFalpha drives myostatin expression and inhibits protein synthesis both of which are important pathologies CS (Qiu et al., 2013).

Methods: Experiment was performed using the MYOSCREEN ^TM platform (CYTOO, France). Briefly, MYOSCREEN ^TM is a proprietary technology based on micropatterning and defined microenvironments that establish highly mature primary human myotubes with substantial striation and low morphological variability. Primary cells derived from skeletal muscle of healthy human donors are differentiated to form myotubes (multinucleated syncytia) that are highly reminiscent of human muscle tissue. MYOSCREEN ^TM is a fully automated platform that interrogates multiple phenotypes relevant for muscle physiology including myotube area, fusion index, and total nuclei.

On Day 0 expanded primary myoblasts from a healthy human donor were seeded at 10,000 cells per well for 24 hour at 37deg C. On Day 1, cells were incubated according to Cytoo’s instructions/protocol in differentiation media based on DMEM comprising 0.1% horse serum and containing indicated amino acid combinations (Table 16) at 4X, 10X, 20X, and 30X of the concentration in the cirrhosis media or with IGF-1 (150ng/mL) as a positive control.

Importantly, treatment groups were prepared in PBS and final concentration in all wells, including controls, was 10% PBS. On Day 2 cells were switched to Cirrhosis Media based on DMEM comprising 0.1% horse serum and 0.5X amino acids at ratios of plasma of cirrhosis (Kakazu et al., 2013) containing atrophy inducer TNFalpha (10ng/mL) and again treated according to Day 1 and Table 16. On Day 6 cells were fixed with 5% Formalin for 30 minutes at room temperature. Fixed cells were processed for immunostaining with primary antibody against Troponin T to stain myotubes and Hoeschst dye for nuclei. Image acquisition was done at 10x magnification using Operetta High Content Imaging System and analysis was performed using a proprietary and dedicated algorithm on the Acapella High Content Imaging System (Perkin Elmer, CYTOO).

Results: Five amino acid compositions promoted atrophy in response to TNF: HKT, LIVHKTFMW, ODHKT, ODLIVHKTFMW, DLIVHKTFMW. Atrophy promoting

compositions contained essential amino acids H, K, T, F, M, W. Importantly the atrophy inducing activity of HKT was only observed at the highest dose levels this effect was

ameliorated when combined with ODLIV to comprise the ODLIVHKT composition that is the focus of this application. Moreover, the atrophy promoting activity of EAAs was maintained with ODLIV when FMW were also present which serves as stronger rationale for the exclusion of MFW from the amino acid composition. Interestingly, only one composition was able to significantly reduce atrophy that was induced by TNF alpha, OLIV. In line with this observation, combinations containing OLIV perform worse in the atrophy assay when aspartate (D) is present (e.g. ODLIV). These observations suggest that high levels of OLIV are able reduce atrophy and prevent atrophy-inducing activity of HKT activity at high doses. From these observations it is concluded that lower levels of essential amino acids are to be combined with higher levels of OLIV to form a maximally efficacious combination.

SUMMARY

Results in in vitro model systems (hepatocytes and myotubes) combined with

pharmacokinetic profiles of amino acids highlighted the importance of considering doses, potential interactions, and target tissues when designing combinations.

In the case of ornithine and aspartate, ornithine is beneficial in both liver (Examples 2-6 and 9) and muscle model systems (Example 10) while aspartate is only beneficial to the liver model (Example 2-6 and 9). In this context the surprising PK profile of ODLIVHKT minimizing D exposure to peripheral tissues is highly relevant. Pharmacokinetic (PK) results from BDL and healthy rats and humans with mild hepatic insufficiency demonstrate that the composition ODLIVHKT reduces overall peripheral exposure of D while maintaining exposure of O. Since ODLIVHKT is administered by oral dosing, it is predicted here that portal circulation should contain higher levels of D and achieve desired exposure to the liver while limiting exposure to the muscle tissue. Administration of equivalent doses of OD alone results in an approximately four-fold increase in plasma D whereas an equivalent dose as part of the composition

ODLIVHKT results in less than two-fold increase.

In the case of HKT, compositions containing high doses of HKT performed worse in both the myotube atrophy and hepatic albumin production assays. The negative effects of HKT are diminished when combined with ODLIV at high doses. Since essential amino acids HKT are necessary to support protein synthesis, a desired PD response of ODLIVHKT, these amino acids should be dosed at lower ratios than ODLIV in order to achieve efficacy and minimize negative effects.

Therefore, ODLIV should be included in the composition in higher amounts than HKT. In other words, HKT should be dosed at lower ratios than ODLIV. The composition should comprise more of ODLIV than of H, K and/or T. For example, the composition could comprise about 2 : 1 ODLIV to HKT, or at least 50 to 66% ODLIV and at most 20 to 33% HKT. While the invention has been particularly shown and described with reference to a preferred embodiment and various alternate embodiments, it will be understood by persons skilled in the relevant art that various changes in form and details can be made therein without departing from the spirit and scope of the invention.

All references, issued patents and patent applications cited within the body of the instant specification are hereby incorporated by reference in their entirety, for all purposes.