Title:
METHOD, APPARATUS, AND COMPUTER PROGRAM PRODUCT FOR COMPRESSION AND DECOMPRESSION OF A GENE SEQUENCING IMAGE
Document Type and Number:
WIPO Patent Application WO/2009/138938
Kind Code:
A3
Abstract:
A method for compression and/or decompression of bio-medical images such as DNA sequencing images is provided. The method comprises regeneration of a complete image using multiple distribution functions generated on the fly. The compression ratio achieved is in the order of 10 to 20 times, and is near lossless with respect to the clinically relevant information; which makes it well suited for these DNA sequencing images.
Inventors:
DHAND HARSH (IN)
DIMITROVA NEVENKA (US)
MISRA HANSRAJ (IN)
DIMITROVA NEVENKA (US)
MISRA HANSRAJ (IN)
Application Number:
PCT/IB2009/051921
Publication Date:
October 27, 2011
Filing Date:
May 11, 2009
Export Citation:
Assignee:
KONINKL PHILIPS ELECTRONICS NV (NL)
DHAND HARSH (IN)
DIMITROVA NEVENKA (US)
MISRA HANSRAJ (IN)
DHAND HARSH (IN)
DIMITROVA NEVENKA (US)
MISRA HANSRAJ (IN)
International Classes:
H04N7/26; G06K9/38
Other References:
MISHRA H ET AL: "A Compression scheme for archiving DNA sequencing images", GENOMIC SIGNAL PROCESSING AND STATISTICS, 2008. GENSIPS 2008. IEEE INTERNATIONAL WORKSHOP ON, IEEE, PISCATAWAY, NJ, USA, 8 June 2008 (2008-06-08), pages 1 - 5, XP031280832, ISBN: 978-1-4244-2371-2
ROBERT BIERMAN ET AL: "MACE", PROCEEDINGS OF THE 2006 ACM SYMPOSIUM ON APPLIED COMPUTING , SAC '06, 1 January 2006 (2006-01-01), New York, New York, USA, pages 167 - 172, XP055003303, ISBN: 978-1-59-593108-5, DOI: 10.1145/1141277.1141315
AMIDROR I: "SCATTERED DATA INTERPOLATION METHODS FOR ELECTRONIC IMAGING SYSTEMS: A SURVEY", JOURNAL OF ELECTRONIC IMAGING, SPIE / IS & T, vol. 11, no. 2, 1 April 2002 (2002-04-01), pages 157 - 176, XP001115909, ISSN: 1017-9909, DOI: DOI:10.1117/1.1455013
SOLEXA: "Application Note: DNA sequencing", INTERNET CITATION, 2006, XP002452169, Retrieved from the Internet [retrieved on 20070921]
THOMAS M LEHMANN ET AL: "Survey: Interpolation Methods in Medical Image Processing", IEEE TRANSACTIONS ON MEDICAL IMAGING, IEEE SERVICE CENTER, PISCATAWAY, NJ, US, vol. 18, no. 11, 1 November 1999 (1999-11-01), XP011035921, ISSN: 0278-0062
ROBERT BIERMAN ET AL: "MACE", PROCEEDINGS OF THE 2006 ACM SYMPOSIUM ON APPLIED COMPUTING , SAC '06, 1 January 2006 (2006-01-01), New York, New York, USA, pages 167 - 172, XP055003303, ISBN: 978-1-59-593108-5, DOI: 10.1145/1141277.1141315
AMIDROR I: "SCATTERED DATA INTERPOLATION METHODS FOR ELECTRONIC IMAGING SYSTEMS: A SURVEY", JOURNAL OF ELECTRONIC IMAGING, SPIE / IS & T, vol. 11, no. 2, 1 April 2002 (2002-04-01), pages 157 - 176, XP001115909, ISSN: 1017-9909, DOI: DOI:10.1117/1.1455013
SOLEXA: "Application Note: DNA sequencing", INTERNET CITATION, 2006, XP002452169, Retrieved from the Internet
THOMAS M LEHMANN ET AL: "Survey: Interpolation Methods in Medical Image Processing", IEEE TRANSACTIONS ON MEDICAL IMAGING, IEEE SERVICE CENTER, PISCATAWAY, NJ, US, vol. 18, no. 11, 1 November 1999 (1999-11-01), XP011035921, ISSN: 0278-0062
Attorney, Agent or Firm:
KROEZE, John et al. (building 44, 5656 AE Eindhoven, NL)
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