GALUSZKA PETR (CZ)
FREBORT IVO (CZ)
WO2003050287A2 | 2003-06-19 |
CZ304935B6 | 2015-01-28 | |||
US20090165174A1 | 2009-06-25 |
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SCHMIILLING, T.; WERNER, T.; RIEFLER, .; KRUPKOVA, E.; BARTRINA Y MANNS, 1., J PLANT RES., vol. 116, 2003, pages 241 - 52
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CLAIMS 1. A method of preparation of barley plants resistant to drought, characterized in that a nucleotide sequence is inserted into the barley genome, said nucleotide sequence containing a sequence with at least 80% identity to the sequence of the gene AtCKXl selected from the group comprising the sequences SEQ ID NO. 1, SEQ ID NO. 2 and SEQ ID NO. 3, or said nucleotide sequence containing a sequence with at least 90% identity to the nucleotide sequence encoding a polypeptide selected from the group comprising the sequences SEQ ID NO. 7, SEQ ID NO. 8, SEQ ID NO. 9. 2. The method according to claim 1, characterized in that the nucleotide sequence further contains β-glukosidase promoter. 3. The method according to any one of the preceding claims, characterized in that the nucleotide sequence is inserted using the Agrobacterium tumefaciens . 4. An expression cassette, characterized in that it contains promoter-^t 7-terminator, whereas AtCKXl is a sequence with at least 80% identity to a sequence selected from the group containing the sequences SEQ ID NO. 1, SEQ ID NO. 2 and SEQ ID NO. 3, or AtCKXl is a sequence with at least 90% identity to a nucleotide sequence encoding the polypeptide selected from the group containing the sequences SEQ ID NO. 7, SEQ ID NO. 8, SEQ ID NO. 9. 5. The expression cassette according to claim 4, characterized in that it contains β- glucosidase promoter:A ' tCKXl vacuolar: :NOS terminator, and it has a sequence with at least 80% identity, preferably at least 90% identity, to the sequence SEQ ID NO. 4. 6. The expression cassette according to claim 4, characterized in that it contains β- glucosidase promoter: AtCKXl apoplastic::NOS terminator, and it has a sequence with at least 80% identity, preferably at least 90% identity, to the sequence SEQ ID NO. 5. 7. The expression cassette according to claim 4, characterized in that it contains β- glucosidase promoter: lAtCKXJ cytosolic::NOS terminator, and it has a sequence with at least 80% identity, preferably at least 90% identity, to the sequence SEQ ID NO. 6. 8. Use of the expression cassette according to any one of claims 4 to 7 in the production of barley plants showing resistance against drought. |
Background Art
Barley (Hordeum vulgare) is an economically important plant that is used mainly for the production of malt, and it is furthermore a crop used in food production, feeding, and pharmaceutical industry. Modification of its genetic properties may lead to a significant improvement of agricultural parameters of this cereal.
The architecture of the plant may be specifically modified by changing the levels of cytokinins, plant hormones (Mok DWS and Mok MC. (2001), Ann Rev Plant Physiol Plant Mol Biol. 52:89-118) that participate in the regulation of a number of key processes occuring in plants, such as for example division and differentiation of cells (Bianco MD, Giustini L, Sabatini S. (2013), New Phytol. 199:324-38), resistance to stress (Dobrev PI, Vankova R. (2012), Methods Mol Biol. 913:251-61; Kuppu S, Mishra N, Hu R, Sun L, Zhu X, Shen G, Blumwald E, Payton P, Zhang H. (2013), PLoS One. 8:e64190), and delayed senescence (Khan M, Rozhon W, Poppenberger B. (2013), Gerontology, (in print)). The individual forms of cytokinins and their derivatives differ in respect of their biological activity. According to the cited publications, it is apparent that these hormones are continuously intensively studied for their key influence on the growth and development of the plants, which can be used in growing agriculturally significant crops for example to increase the yield (Powell AF, Paleczny AR, Olechowski H, Emery RJ. (2013), Plant Physiol Biochem. 64:33-40) or to improve the resistance to biotic stress (Reusche M, laskova J, Thole K, Truskina J, Novak O, Janz D, Strnad M, Spichal L, Lipka V, Teichrnann T. (2013), Mol Plant Microbe Interact. 26:850-60) and abiotic stress (Dobrev PI, Vankova R. (2012), Methods Mol Biol. 913:251-61). With respect to the increase in world population, there are ongoing efforts to utilize land for agricultural purposes also in the areas that are currently not suitable for growing crops. It is also believed that the negative changes of climate, including those caused by human activity, will result in longer dry periods and temperature rise. Efforts to increase the resistance of important plants to drought stress while using different approaches are therefore considerable in recent years and they correspond to the seriousness of the situation (Grayson M. (2013), Agriculture and drought. Nature Outlook 01:S1).
Degradation of cytokinins is ensured in each plant by enzyme activity of cytokinin dehydrogenase (EC 1.5.99.12; CKX) (Galuszka P, Frebort I, Sebela M, Sauer P, Jacobsen S, Pec P. (2001), Eur J Biochem.268:450-61), which occurs in the plants in various forms acting in various cell compartments (Werner T, Motyka V, Laucou V, Smets R, Van Onckelen H, Schmulling T. (2003), Plant Cell. 15:2532-50; Schmulling, T. s Werner, T., Riefler, M, Krupkova, E. and Bartrina y Manns, I. (2003), J Plant Res. 116:241-52; Liu Z, Lv Y, Zhang M, Liu Y, Kong L, Zou M, Lu G, Cao J, Yu X. (2013), BMC Genomics. 14:594 (in print); Tsai YC, Weir NR, Hill K, Zhang W, Kim HJ, Shiu SH, Schaller GE, Kieber JJ. (2012), Plant Physiol. 158:1666-84) in various stages of development of the plants (Powell AF, Paleczny AR S Olechowski H, Emery RJ. (2013), Plant Physiol Biochem. 64:33-40). The individual forms of CKX have also different substrate specificity, which is determined by a different localization of cytokinins in the plant tissue. In the plant A. thaliana, the substrate specificity of CKX (Galuszka P, Popelkova H, Werner T, Frebortova J, Pospisilova H, Mik V et al. (2007), J Plant Growth Regul. 26:255-67) and the localization of the individual CKX is described most thoroughly. A. thaliana contains two vacuolar CKX (AtCKXl and AtCKX3), one cytosolic CKX (AtCKX7), and the remaining four CKX are probably apoplastic (Werner T, Motyka V, Laucou V, Smets R, Van Onckelen H, Schmulling T. (2003), Plant Cell. 15:2532-50). It has been found out that the secreted (apoplastic) forms of CKX prefer free cytokinin bases as substrates, vacuolar forms prefer N-glycosyl cytokinins (Galuszka et al. (2007), J Plant Growth Regul. 26:255-67). It is interesting that vacuolar CKX prefer di- and triphosphates of cytokinins that are primary products of the de novo cytokinin biosynthesis in the plants (Kowalska M, Galuszka P, Frebortova J, Sebela M, Beres T, Hluska T, Smehilova M, Bilyeu KD, Frebort I. (2010), Phytochemistry. 71:1970-8). Based on this, we can deduce different biological functions of the individual forms of CKX. It follows that by the combination of the desired form of the enzyme, signal sequence for protein targeting to the individual compartments, and suitable tissue-specific promoter, we can specifically influence the resulting phenotype of the plant.
The study of the genetically modified dicotyledonous plants with overexpressed CKX was started in 2001 (Werner T, Motyka V, Strnad M, Schmiilling T (2001), Proc Natl Acad Sci U S A. 98:10487-92). The phenotype of such plants is called cytokinin- deficient, and it is characterized mainly by reduced aerial part and productivity and further by the increase of the root system (Werner T, Motyka V, Strnad M, Schmulling T (2001), Proc Natl Acad Sci U S A. 98:10487-92; Galuszka P, Frebortova J, Werner T, Yamada M, Strnad M, Schmiilling T, Frebort I. (2004), Eur J Biochem. 271 :3990-4002). In particular, prepared genetically modified plants A. thaliana with overexpression of AtC Xl, 2, 3, 4, 5 or 6 have similar cytokinin-deficient phenotype which was the most significant in the plants with overexpression of AtCKXl, 3 and 5 (Werner et al. (2003), Plant Cell. 15:2532-50). Later, Arabidopsis plants with root-specific overexpression of AtCKX3 were prepared, in which the mass of roots was increased by as much as 40% without any negative influence to the fertility of the plants, and the modified plants were showing a higher resistance to drought stress (Werner T, Nehnevajova E, Kollmer I, Novak O, Strnad M, Kramer U, Schmulling T. (2010), Plant Cell. 22:3905-20). A similar phenotype was observed also in tobacco plants with AtCKXl overexpression, where the resistance of these plants to drought was also confirmed (Mackova H, Hronkova M, Dobra J, Tureckova V, Novak O, Lubovska Z, Motyka V, Haisel D, Hajek T, PraSil IT, Gaudinova A, Storchova H, Ge E, Werner T, Schmulling T, Vankova R. (2013), J Exp Bot. 64:2805-15).
Unlike dicotyledonous plants, monocotyledonous plants are more difficult to transform, mainly as a result of insufficient regeneration of the plants from non-differentiated tissue. To obtain stable lines, the same transformation as in the dicotyledonous plants is used - A. tumefaciens mediated transformation (Harwood WA } Bartlett JG, Alves SC, Perry M, Smedley MA, Leyland N, Snape JW. (2009), In Methods in Molecular Biology, Vol. 478 (Jones H. D, Shewry P. R. ed.), pp. 137-147, Humana Press, New York, USA). Based on published data, the manipulation with CKX genes in a monocotyledonous plant was performed only once, namely for barley, in our laboratory. The gene was a corn gene ZmCKXl (Mrizova , Jiskrova E, Vyroubalova &, Novak O, Ohnoutkova L, Pospisllova H, Frebort I, Harwood WA, Galuszka P. (2013), Accepted for publication to PLOS ONE). Unlike the overexpression of the CKX protein in dicotyledonous plants, the cytokinin- deficient phenotype in the plants of barley with CKX under the constitutive promoter was too strong, which was manifested by a reduced capability of regeneration of transgenic plants, their sterility, and premature senescence. For this reason, β-glucosidase promoter was used, which has the strongest activity in the roots (Gu R, Zhao L, Zhang Y, Chen X, Bao J, Zhao J, Wang Z, Fu J, Liu T, Wang J, Wang G. (2006), Plant Cell Rep. 25:1157- 65), for the regulation of expression of ZmCKXl (unpublished data). These plants also had a reduced capability of regeneration and strong cytokinin-deficient phenotype (Fig. 1). 5 independent transgenic lines of barley were obtained, in which as much as 10-times increased activity of CKX was detected. These plants were sterile due to the introduction of ZmCK l and did not provide any progeny. The conclusion from these data is that the results obtained for CKX overexpression in dicotyledonous plants cannot be applied to monocotyledonous cereals, where the regulation of metabolism of cytokinins may occur in a different way (Hirose N, Makita N, Kojima M, Kamada-Nobusada T, Sakakibara H. (2007) Plant Cell Physiol. 48-.523-39).
Further available data about monocotyledonous plants with overproduced CKX are presented in the document US 2009/0165174. They relate to overexpression of corn CKX in corn. According to our data shown above, the use of the corn ZmCKXl in barley is unsuitable and it is therefore impossible to apply the results obtained by the study of genetically modified corn to barley.
Disclosure of the Invention
Subject of the present invention is a method of preparation of barley plants resistant to drought, wherein a nucleotide sequence is inserted into the barley genome, said nucleotide sequence containing a sequence with at least 80% identity, preferably with at least 90% identity, more preferably with at least 95% identity, to the sequence of the gene AtCKXl (cytokinin dehydrogenase originated from the plant Arabidopsis thaliana) selected from the group comprising the sequences SEQ ID NO. 1, SEQ ID NO. 2 and SEQ ID NO. 3, or said nucleotide sequence containing a sequence with at least 90% identity, preferably with at least 95% identity, to the nucleotide sequence encoding a polypeptide selected from the group comprising the sequences SEQ ID NO. 7, SEQ ID NO. 8, SEQ ID NO. 9. The inserted nucleotide sequence encodes an enzyme with cytokinin dehydrogenase activity. In a preferred embodiment, the inserted sequence is controlled by β-glukosidase promoter. In a preferred embodiment, the sequence is inserted using the Agrobacterium tumefaciens.
The 80% identity, the preferred 90% identity, the more preferred 95% identity with the above-listed sequences is achieved for example by extension or shortening of the sequence or by point mutations in the sequence, especially such mutations which do not change the encoded amino acid due to degeneration of the genetic code.
Within the framework of the present invention, it has been found out that for the preparation of the genetically modified plants resistant to drought, it is suitable to use the vacuolar AtCKXl (nucleotide sequence SEQ ID NO. 1; natural form; Werner et al. (2001), Proc Natl Acad Sci U S A. 98:10487-92, corresponding amino-acid sequence SEQ ID NO. 7), apoplastic AtCKXl (nucleotide sequence SEQ ID NO. 2, signal peptide from AtCKX2, corresponding amino acid sequence SEQ ID NO. 8) or the cytosolic form AtCKXl (nucleotide sequence SEQ ID NO. 3, without signal peptide, corresponding amino acid sequence SEQ ID NO. 9), in a preferred embodiment under the β-glukosidase promoter with the highest rate of expression in the root (Gu et al, (2006), Plant Cell Rep. 25:1157-65). Using A. tumefaciens, these sequences can be integrated to the genome of barley in order to obtain transgenic plants in which a higher resistance to drought was observed. The increased resistance of the plants to drought increases the chances of survival of the barley plants growing in adverse climatic conditions.
Subject of the present invention is further an expression cassette which contains promoter-^iCJCX -terminator. AtCKXl is a sequence with at least 80% identity, preferably at least 90% identity, more preferably at least 95% identity, to a sequence selected from the group containing the sequences SEQ ID NO. 1, SEQ ID NO. 2 and SEQ ID NO. 3, or AtCKXl is a sequence with at least 90% identity, preferably at least 95% identity, to a nucleotide sequence encoding the polypeptide selected from the group containing the sequences SEQ ID NO. 7, SEQ ID NO. 8, SEQ ID NO. 9. The promoter is preferably β-glucosidase promoter, the terminator is preferably NOS terminator. In one preferred embodiment, the expression cassette contains: β-glucosidase vacuolar::NOS terminator, and it has a sequence with at least 80% identity, preferably at least 90% identity, more preferably at least 95% identity, to the sequence SEQ ID NO.4.
SEQ ID NO.4:
Positions of the individual functional sections:
β-glucosidase promoter: 50 bp - 950 bp
Vacuolar signal sequence: 966 bp - 1076 bp
AtCKXl (excluding the signal sequence): 1077 bp - 2693 bp
NOS terminator: 2721 bp - 2974 bp
I I I 1 I I I I I I I I I.... I I I
1 I I I I I I I \ I I I ....I I I I ...I I I I I I I I I ] ] t I I I I I
....I.... I ....I.... I I .... I .... I .... I .... I
I .... I 1 I I I I .... I I I I ! I I I I ...,|....| I ! I I I I [ I I I I I I
960 970 9SO ] I I I I I I I I— I — I— I — I— I — I— I — I— I — I— I
1110 1120 1130 1140 1150 1160 1170 1180 1190 1200
GAATTACCTT CTTCAAAT-CC TTCAGATATT CGTTCCTCAT TA3TTTCACT AGATTTGGAG GGTTATATAA GCTTCGACGA TGTCCRCAAT GTGGCCAAGG
1210 1220 1230 1240 1250 1260 1270 1280 1290 1300
ACTTTGGCAA CAGATACCAG TTACCACCTT TGGCAATTCT ACATCCAAGG TCAGTTTTTG ATATTTCATC GATGATGAAG CATATAG AC ATCTGGGCTC
....I.... I ....I.... I ....I.... I ....I....I ....I.... I .... ί .... J ....]....! ....]..,.[ ....I,... I ....I.... I
1310 1320 1330 1340 1350 1360 1370 1380 1390 1400
CACCTCAAAT CTTACAGTAG CAGCTAGAGG CCAIGGTCAC TCGCTTCAAG GACAAGCTCT AGCTCATCAA GGTGTTGTCA TCAAAAIGGA GTCACTTCGA
I i t I I I I ! 1 I I I I I I I i t i I
1410 1420 1430 1440 1450 1460 1470 1480 1490 1500
AGTCCTGATA TCAGGATTTA TAAGGGGAAG CAACCATATG TTGATGTCTC AGGTGGTGAA ATATGGATAA ACATTCIACG CGAGACTCTA AAATACGGTC
.... I I ! .... I I I I I I I I 1 I I I I I I I I
1510 1520 1530 1540 1550 1560 1570 1580 1590 1600
TTTCACCAAA GTCCTGGACA GACTACCTTC ATTTGACCGT TGGAGGTACA CTATCTAATG CTGGAATCAG CGGTCAAGCA TTCAAGCATG GACCCCAAAT I I I 1 I I I I I I I I I I I I I I I I
1610 1620 1630 1640 1650 1660 1670 1680 1690 1700
CAACAACGTC TACCAGCTAG AGATTGTTAC AGGGAAAGGA GAAGTCGTAA CCTGTTCTGA GAAGCGGAAT TCTGAACTTT TCTTCAGTGT TCTTGGCGGG
1710 1720 1730 1740 1750 1760 1770 1780 1790 1800
CTTGGACAGT TTGGCATAAT CACCCGGGCA CGGATCTCTC TTGAACCAGC ACCGCAIATG GTTAAATGGA TCAGGGTACT CTACTCTGAC TTTTCTGCAT
— I I — I— I — I— I — I— i ]— i — I— I — I— I — I— I — i— ι — i— i
1810 1820 1830 1840 1850 I860 1870 1880 1890 1900
TTTCAAGGGA CCAAGAATAT CTGATTTCGA AGGAGAAAAC TTTTGATTAC GTTGAAGGAT TTGTGATAAT CAATAGAACA GACCriCTCA ATAATTGGCG
....(.... I ....|.... I ....I.... I . I .... I ....I.... I ....I....I ....I.... I ....I.... I ....I.... I
1910 1920 1930 1940 1950 1960 1970 I960 1990 2000
ATCGTCATIC AGTCCCAACG ATTCCACACA GGCAAGCAGA IICAAGTCAG ATGGGAAAAC TCTTTATTGC CTAGAAGTGG TCAAATATTT CAACCCAGAA
— t I — i— J — I— I ....I— I — I— I ....I.... I ....I— I ....I— I — I— ι — ι— ι
2010 2020 2030 2040 2050 2060 2070 2030 2090 2100
GAAGCTAGCT CTATGGATCA GGAAACTGGC AAGTTACTTT CAGAGTTAAA TTATATTCCA TCCACTTTGT TTTCATCTGA AGTGCCATAT ATCGAGTITC
2110 2120 2130 2140 2150 2160 2170 2180 2190 2200
TGGATCGCGT GCATATCGCA GAGAGAAAAC TAAGAGCAAA GGGTTTATGG GAGGTTCCAC ATCCCTGGCT GAATCTCCTG ATTCCTAAGA GCAGCATATA
I.... I ....I I I I I I ....I I I I I I I....I I I
2210 2220 2230 2240 2250 2260 2270 2230 2290 2300
CCAATTTGCT ACAGAAGTII TCAACAACAT TCTCACAAGC AACAACAACG GTCCTATCCT TATTTATCCA GTCAATCAAT CCAAGTGGAA GAAACATACA
2310 2320 2330 2340 2350 2360 2370 2380 2390 2400
TCTTTGATAA CTCCAAATGA AGATATATTC TATCTCGTAG CCTTTCTCCC CTCTGCAGTG CCAAATTCCT CAGGGAAAAA CGATCTAGAG TACCTTTTGA
2410 2420 2430 2440 2450 2460 2470 2480 2490 2500
AACAAAACCA AAGAGTTATG AACTTCTGCG CAGCAGCAAA CCTCAACGTG AAGCAGTATT TGCCCCATTA TGAAACTCAA AAAGAGTGGA AATCACACTT
I t ! I I....I I 1 I i I I I I I i ( ) ! I
2510 2520 2530 2540 2550 2560 2570 2580 2590 2600
TGGCAAAAGA TGGGAAACAT TTGCACAGAG GAAACAAGCC TACGACCCTC TAGCGATTCT AGCACCTGGC CAAAGAATAT TCCAAAAGAC AACAGGAAAA
....I I I I I I t 1 I t I 1 I I 1 I I I I I
2610 2620 2630 2640 2650 2660 2670 2660 2690 2700
TTATCTCCCA TCCAACTCGC AAAGTCAAAG GCAACAGGAA GTCCTCAAAG GTACCATTAC GCATCAATAC TGCCGARACC TAGAACIGTA TAAGICGACT 1 I I I I I I.... I ....I I I I I I I I I.... I
2710 2720 2730 2740 27S0 2760 2770 2790 2790 2800
CGAGTCTAGA AGTCGAAGCA GATCGTTCAA ACATTTGGCA ATAAAGTTTC TTAAGATTGA ATCCTGTTGC CGGTCTTGCG ATGATTATCA TATAATTTCT
....I.... I .... I .... I I ....I....! ....I.... I ....I.... I .... I .... I
2810 2820 2830 2840 2B50 2860 2870 2880 2890 2900
GTTGAATTAC GTTAAGCATG TAATAATTAA CATGTAATGC ATGACGTTAT TTATGAGATG GGTTTTTATG ATTAGAGTCC CGCAATTATA CATTTAATAC
1.... I I I I I I I I I [ ! I I I ] ! I I t
2910 2920 2930 2940 2950 2960 2970 2980 2990 3000
GCGATAGAAA ACAAAATATA GCGCGCAAAC TAGGATAAAT TATCGCGCGC GGTGTCATCT ATGTTACTAG ATCGACCGGC AAGCAAGCTG ATATGCGGCC
3010 3020 3030 3040 30S0 3060 3070 3030 3090 3100
GCACTCGAGA TAICTAGACC CAGCTTTCTT GTACAAAGTG GTTGATGGGC TGCAGGAATT CGATATCAAG CTTATCGATA CCGTCGACCT CGAGGGGGAT
...,| ,...| ....I ....I ...
3110 3120
CACCACTTTG TACAAGAAAG CTG
Protein AtCKXl vacuolar (575 amino acids, SEQ ID NO. 7)
AUG GGA UUG ACC UCA UCC UUA CGG UUC CAU AGA CAA AAC AAC AAG
Met Gly Leu Thr Ser Ser Leu Arg Phe His Arg Gin Asn Asn Lys
ACU UDC CDC GGA AUC UUC AUG AUC UUA GUU CUA AGC UGU AUA CCA
Thr Phe Leu Gly lie Phe Met lie Leu Val Leu Ser Cys lie Pro
GGU AGA ACC AAU CUU UGU UCC AAU CAU UCU GUU AGU ACC CCA AAA
Gly Arg Thr Asn Leu Cys Ser Asn His Ser Val Ser Thr Pro Lys
GAA UUA CCU UCU UCA AAU CCU UCA GAU AUU CGU UCC UCA UUA GUU
Glu Leu Pro Ser Ser Asn pro Ser Asp lie Arg Ser Ser Leu Val
UCA CUA GAU UUG GAG GGU UAU AUA AGC UUC GAC GAU GUC CAC AAU
Ser Leu Asp Leu Glu Gly Tyr lie Ser Phe Asp Asp Val His Asn
GUG GCC AAG GAC UUU GGC AAC AGA UAC CAG UUA CCA CCU UUG GCA
Val Ala Lys Asp Phe Gly Asn Arg Tyr Gin Leu Pro Pro Leu Ala
ADU CUA CAU CCA AGG UCA GUU DUU GAU AUU UCA UCG AUG AUG AAG
lie Leu His Pro Arg Ser Val Phe Asp He Ser Ser Met Met Lys
CAU AUA GUA CAU CUG GGC UCC ACC UCA AAU CUU ACA GUA GCA GCU
His He Val His Leu Gly Ser Thr Ser Asn Leu Thr Val Ala Ala
AGA GGC CAU GGU CAC UCG CUU CAA GGA CAA GCU CUA GCU CAU CAA
Arg Gly His Gly His Ser Leu Gin Gly Gin Ala Leu Ala His Gin
GGU GUU GUC AUC AAA AUG GAG UCA CUU CGA AGU CCU GAU AUC AGG
Gly Val Val He Lys Met Glu Ser Leu Arg Ser Pro Asp He Arg AUU UAU AAG GGG AAG CAA CCA UAO GUU GAU GUC UCA GGU GGU GAA He Tyr Lys Gly Lys Gin Pro Tyr Val Asp Val Ser Gly Gly Glu AUA UGG AUA AAC AUU CUA CGC GAG ACU CUA AAA UAC GGU CUU UCA
He Trp He Asn He Leu Arg Glu Thr Leu Lys Tyr Gly Leu Ser
CCA AAG UCC UGG ACA GAC UAC CUU CAU UUG ACC GUU GGA GGU ACA
Pro Lys Ser Trp Thr Asp Tyr Leu His Leu Thr Val Gly Gly Thr
CUA UCU AAU GCU GGA AUC AGC GGU CAA GCA UUC AAG CAU GGA CCC
Leu Ser Asn Ala Gly He Ser Gly Gin Ala Phe Lys His Gly Pro
CAA AUC AAC AAC GUC UAC CAG CUA GAG AUU GUU ACA GGG AAA GGA
Gin He Asn Asn Val Tyr Gin Leu Glu He Val Thr Gly Lys Gly
GAA GUC GUA ACC UGU UCU GAG AAG CGG AAU UCU GAA CUU UUC UUC
Glu Val Val Thr Cys Ser Glu Lys Arg Asn Ser Glu Leu Phe Phe AGU GUU CUU GGC GGG CUU GGA CAG UUU GGC AUA AUC ACC CGG GCA
Ser Val Leu Gly Gly Leu Gly Gin Phe Gly He He Thr Arg Ala
CGG AUC UCU CUU GAA CCA GCA CCG CAU AUG GUU AAA UGG AUC AGG
Arg He Ser Leu Glu Pro Ala Pro His Met Val Lys Trp He Arg
GUA CUC UAC UCU GAC UUU UCU GCA UUU UCA AGG GAC CAA GAA UAU
Val Leu Tyr Ser Asp Phe Ser Ala Phe Ser Arg Asp Gin Glu Tyr
CUG AUU UCG AAG GAG AAA ACU UUU GAU UAC GUU GAA GGA UUU GUG
Leu He Ser Lys Glu Lys Thr Phe Asp Tyr Val Glu Gly Phe Val
AUA AUC AAU AGA ACA GAC CUU CUC AAU AAU UGG CGA UCG UCA UUC
He He Asn Arg Thr Asp Leu Leu Asn Asn Trp Arg Ser Ser Phe AGU CCC AAC GAU UCC ACA CAG GCA AGC AGA UUC AAG UCA GAU GGG
Ser Pro Asn Asp Ser Thr Gin Ala Ser Arg Phe Lys Ser Asp Gly
AAA ACU CUU UAU UGC CUA GAA GUG GUC AAA UAU UUC AAC CCA GAA
Lys Thr Leu Tyr Cys Leu Glu Val Val Lys Tyr Phe Asn Pro Glu
GAA GCU AGC UCU AUG GAU CAG GAA ACU GGC AAG UUA CUU UCA GAG
Glu Ala ser Ser Met Asp Gin Glu Thr Gly Lys Leu Leu Ser Glu
UUA AAU UAU AUU CCA UCC ACU UUG UUU UCA UCU GAA GUG CCA UAU
Leu Asn Tyr He Pro Ser Thr Leu Phe Ser Ser Glu Val Pro Tyr ADC GAG UUU CUG GAU CGC GUG CAU AUC GCA GAG AGA AAA CUA AGA lie Glu Phe Leu Asp Arg Val His He Ala Glu Arg Lys Leu Arg
GCA AAG GGU UUA UGG GAG GUU CCA CAU CCC UGG CUG AAU CUC CUG
Ala Lys Gly Leu Trp Glu Val Pro His Pro Trp Leu Asn Leu Leu
AUU CCU AAG AGC AGC AUA UAC CAA UUU GCU ACA GAA GUU UUC AAC
He Pro Lys Ser Ser He Tyr Gin Phe Ala Thr Glu Val Phe Asn
AAC AUU CUC ACA AGC AAC AAC AAC GGU CCU ADC CUU AUU UAU CCA
Asn He Leu Thr Ser Asn Asn Asn Gly Pro He Leu He Tyr Pro
GDC AAU CAA UCC AAG UGG AAG AAA CAD ACA DCO UUG AUA ACD CCA
Val Asn Gin Ser Lys Trp Lys Lys His Thr Ser Leu He Thr Pro
AAU GAA GAU AUA UUC UAU CUC GUA GCC UDU CDC CCC UCU GCA GUG
Asn Glu Asp He Phe Tyr Leu val Ala Phe Leu Pro Ser Ala Val
CCA AAU UCC UCA GGG AAA AAC GAU CUA GAG UAC CUU UUG AAA CAA
Pro Asn Ser Ser Gly Lys Asn Asp Leu Glu Tyr Leu Leu Lys Gin.
AAC CAA AGA GUU AUG AAC UUC UGC GCA GCA GCA AAC CUC AAC GUG
Asn Gin Arg Val Met Asn Phe Cys Ala Ala Ala Asn Leu Asn Val
AAG CAG UAU UUG CCC CAU UAU GAA ACU CAA AAA GAG UGG AAA UCA
Lys Gin Tyr Leu Pro His Tyr Glu Thr Gin Lys Glu Trp Lys Ser CAC UUU GGC AAA AGA UGG GAA ACA UUU GCA CAG AGG AAA CAA GCC
His Phe Gly Lys Arg Trp Glu Thr Phe Ala Gin Arg Lys Gin Ala
UAC GAC CCU CUA GCG AUD CUA GCA CCU GGC CAA AGA AUA DUC CAA
Tyr Asp Pro Leu Ala He Leu Ala Pro Gly Gin Arg He Phe Gin
AAG ACA ACA GGA AAA UUA UCU CCC AUC CAA CUC GCA AAG UCA AAG
Lys Thr Thr Gly Lys Leu Ser Pro He Gin Leu Ala Lys Ser Lys
GCA ACA GGA AGU CCU CAA AGG UAC CAU UAC GCA UCA ADA CDG CCG
Ala Thr Gly Ser Pro Gin Arg Tyr His Tyr Ala Ser He Leu Pro
AAA CCU AGA ACU GUA UAA
Lys Pro Arg Thr Val End In another preferred embodiment, the expression cassette contains: β-glucosidase apoplastic::NOS terminator, and it has a sequence with at least 80% identity, preferably at least 90% identity, more preferably at least 95% identity to the sequence SEQ ID NO.5.
SEQ ID NO.5:
Positions of the individual functional sections:
β-glucosidase promoter : 68 bp - 968 bp
Apoplastic signal sequence: 999 bp - 1067 bp
AtCKXl (excluding the signal sequence): 1068 bp - 2684 bp
NOS terminator: 2712 bp -2965 bp
....I....I ....|.... I ,...!....( ....|.... I .... [....! ....(.... ί ....I.... I ....I.... I
....I.... I ..., Ι..-.I I ....I.... I ....|.... I ....I-...! ....!.... I ....I....I ....I.... I
1 I I I I I [ I I ( I 1 I I I i I I I )
....[....I 1....J ....| ....| ....| ....|
....I I I I I I ] t I i I I I I .... I I I I I I I I I I I I I ! ..,.|....| I I I I ....1 I I .... I
I.... I I I i ! I I I I I ! 1 I i ! I I I I
....I.... I ....).... I ,...|....| ....I ....I ....I.... I ....I.... I .... I .... I .... I .... I
....I I I I 1 I I I I I I I I I I I I I I 1110 1120 1130 1140 11S0 1160 1170 118 ° 1190 1200
TCTTCAAATC CTTCAGATAT TCGTTCCTCA TTAGTTTCAC TAGATTTGGA GGGTTATATA AGCTTCGACG ATGTCCACAA TGIGGCCAAG GACTTTGGCA
I....I I I I I I I I I I I
1210 1220 1230 1240 1250 1260 1270 1260 1290 1300
ACAGATACCA GTTACCACCT IIGGCAATTC TACAICCAAG GTCAGTTTTI GATATTTCAT CGATGATGAA GCATATAGTA CATCTGGGCT CCACCTCAAA I I I I I I I
1310 1320 1330 1340 1350 1360 1310 1330 1390 1400
TCTTACAGTA GCAGCTAGAG GCCATGGTCA CICGCTTCAA GGACAAGCIC TAGCTCATCA AGGTGTTGTC ATCAAAATGG AGTCACTACG AAGTCCTGAT I I I I I I I I I I I
1410 1420 1430 1440 1450 1460 1 70 1480 1450 1500
ATTAGGATTT AIAAGGGGAA GCAACCATAT GTTGATGTCT CAGGTGGTGA AATATGGATA AACATTCTAC GCGAGACTCT AAAATACGGT CTTTCACCAA I I— I — I— I — I I I — I I— I
1510 1520 1S30 1540 1550 1560 1570 1580 1590 1600
AGTCCTGGAC AGACTACCTT CATTTGACCG TTGGAGGTAC ACTATCTAAT GCTGGAATCA GCGGTCAAGC ATICAAGCAT GGACCCCAA& TCAACAACGT I ....I.,.. ....|....I ....|.... j ....!.... I ....I
1610 1620 1630 1640 1650 1660 1670 1680 1690 1700
CTACCAGCTA GAGATTGTTA CAGGGAAAGG AGAAGTCGIA ACCTGITCTG AGAAGCGGAA CTCTGAACTT TTCTTCAGTG TTCTTGGCGG GCTTGGACAG
1710 1720 1730 1740 1750 1760 1770 1780 1790 1800
TTTGGCATAA TCACCCGGGC ACGGAICTCT CTTGAACCAG CACCGCATAT GGTTAARTGG ATCAGGGTAC TCTACTCTGA CTITTCTGCA TTTTCAAGGG
.... I I [ I I I I I I I I I .
1B10 1820 1330 1840 1850 1860 1870 1880 1890 1900
ACCAAGAATA TCTGATTTCA AAGGAGAAAA CTTTTGATTA CGTTGAAGGA TTTGTGATAA TCAATAGAAC AGACCTTCTC AATAATTGGC GATCGTCATT I I I ! I [ I I I I
1910 1920 1930 1940 1950 196D 1970 1980 1990 2000
CAGTCCCAAC GATTCCACAC AGGCAAGCAG ATTCAAGTCA GATGGGARAA CTCTTTATTG CCTAGAAGTG GTCAAATATT TCAACCCAGA AGAAGCTAGC
2010 2020 2030 2040 2050 2060 2070 2080 2090 2100
TCTATGGATC AGGAAACTGG CAAGTTACIT TCAGAGTTAA ATTATATTCC ATCCACTTTG TTTTCATCTG AAGTGCCATA TATCGAGTII CTGGATCGCG I I I I I I I I I I
2110 2120 2130 2140 2150 2160 2170 2180 2190 2200
TGCATATCGC AGAGAGAAAA CTAAGAGCAA AGGGTTTATG GGAGGTTCCA CATCCCTGGC TGAATCTCCT GATTCCTAAG AGCAGCATAT ACCAATTTGC
....! I I I ....I I I I I I I
2210 2220 2230 2240 2250 2260 2270 22Θ0 2290 2300
TACAGAAGTT TTCAACAACA TTCTCACAAG CAACAACAAC GGTCCTATCC TTATTTATCC AGTCAATCAA TCCAAGTGGA AGAAACATAC ATCTTTGATA
I ! ! I I I I I I. ...I I I I
2310 2320 2330 2340 2350 2360 2370 2380 2390 2400
ACTCCAAAIG AAGATATAII CTATCTCGTA GCCTTTCTCC CCTCTGCAGT GCCAAAITCC ICAGGGMAA ACGATCTTGA GTACCTTTTG AAACAAftftCC
2410 2420 2430 2440 2450 2460 2470 2430 2490 250O
AAAGAGTTAI GAACTTCTGC GCAGCAGCAA ACCTCAACGT GAAGCAGTAT TTGCCCCATT ATGSAACTCA AAAAGAGTGG AAATCACACT TTGGCAAAAG I I I I I I I I I I I I
2510 2520 2530 2540 2550 2560 2570 2580 2590 2600
ATGGGAAACA TTTGCACAGA GGAAACAAGC CTACGACCCT CTAGCGATTC TAGCACCTGG CCAAAGAATA TTCCAAAAGA CAACAGGAAA ATTATCTCCC
2610 2620 2630 2640 2650 2660 2670 2680 2690 270O
AICCAACTCG CAAAGTCAAA GGCAACAGGA AGTCCTCAAA GGIAICAITA CGCATCAATA CTGCCGAAAC CTACAACTGT ATAAGTCGAC TCGAGICIAG
2710 2720 2730 2740 2750 27S0 2770 2780 2790 2800
AAGTCGAAGC AGATCGTTCA AACATTTGGC AATAAAGTTT CTTAAGATTG AATCCTGTTG CCGGTCTTGC GATGATTATC ATATAATTTC TGTTGAATTA i
2810 2S20 2830 2840 28S0 2860 2B70 2380 2890 2900
CGTTAAGCAT GTAMAATTA ACATGTAATG CATGACGTTA TTTATGAGAT GGGTITTTAT GATTAGAGTC CCGCAATTAT ACATTTAATA CGCGAIAGAA
2910 2920 2930 2940 2950 2960 2970 2980 2990 3000
A&CAAAATAT AGCGCGCAAA CTAGGATAAA TTATCGCGCG CGGTGTCATC TATGTTACIA GAICGACCCG CAAGCAAGCT GATATGCGGC CGCACTCGAG
....I.. ... I
3010 3020 3030 3040 3050 3060 307O 3080 3090 3100
ATATCTAGAC CCAGCTTTCT TGTACAAAGT GGTTGATGGG CTGCAGGAAT TCGATATCAA GCTTATCGAT ACCGTCGACC TCGAGGGGGA TCACCACTTT
3110
GTACAAGAAA GCTG
Protein AtC Xl apoplastic (557 amino-acids, SEQ ID NO. 8)
AUG AUC ACU UUA AUC ACG GUU UUA AUG AUC ACC AAA UCA UCA AAC
Met lie Thr Leu lie Thr Val Leu Met lie Thr Lys Ser Ser Asn
GGC AUG CUU UCG AAU CAU UCU GUU AGU ACC CCA AAA GAA UUA ecu
Gly Met Leu Ser Asn His Ser Val Ser Thr Pro Lys Glu Leu Pro
UCU UCA AAU ecu UCA GAU AUU CGU UCC UCA UUA GUU UCA CUA GAU
Ser Ser Asn Pro Ser Asp He Arg Ser Ser Leu Val Ser Leu Asp
UUG GAG GGU UAU AUA AGC UDC GAC GAU GUC CAC AAU GUG GCC AAG
Leu Glu Gly Tyr He Ser Phe Asp Asp Val His Asn Val Ala Lys
GAC UUU GGC AAC AGA UAC CAG UUA CCA ecu UUG GCA AUU CUA CAU
Asp Phe Gly Asn Arg Tyr Gin Leu Pro Pro Leu Ala He Leu His
CCA AGG OCA GUU UUU GAU AUO UCA UCG AUG AUG AAG CAU AUA GUA
Pro Arg Ser Val Phe Asp He Ser Ser Met Met Lys His He Val
CAU CUG GGC UCC ACC UCA AAU CUU ACA GUA GCA GCU AGA GGC CAU
His Leu Gly Ser Thr ser Asn Leu Thr Val Ala Ala Arg Gly His
GGU CAC UCG CUU CAA GGA CAA GCU CUA GCU CAU CAA GGU GUU GUC
Gly His Ser Leu Gin Gly Gin Ala Leu Ala His Gin Gly Val Val
AUC AAA AUG GAG UCA CUA CGA AGU CCU GAU AUU AGG AUU UAU AAG
He Lys Met Glu Ser Leu Arg Ser Pro Asp He Arg He Tyr Lys GGG AAG CAA CCA UAU GUU GAU GUC UCA GGU GGU GAA AUA UGG AUA
Gly Lys Gin Pro Tyr Val Asp Val Ser Gly Gly Glu He Trp He
AAC AUU CUA CGC GAG ACU CUA AAA UAC GGU CUU UCA CCA AAG UCC
Asn He Leu Arg Glu Thr Leu Lys Tyr Gly Leu Ser Pro Lys Ser UGG ACA GAC UAC CUU CAU DUG ACC GUU GGA GGU ACA CUA UCU AAU Trp Thr Asp Tyr Leu His Leu Thr Val Gly Gly Thr Leu Ser Asn
GCU GGA ADC AGC GGD CAA GCA UUC AAG CAU GGA CCC CAA AUC AAC
Ala Gly lie Ser Gly Gin Ala Phe Lys His Gly Pro Gin He Asn
AAC GUC UAC CAG CUA GAG AUU GUU ACA GGG AAA GGA GAA GUC GUA
Asn Val Tyr Gin Leu Glu He Val Thr Gly Lys Gly Glu Val Val
ACC UGU UCU GAG AAG CGG AAC UCU GAA CUU UUC UUC AGU GUU CUU
Thr Cys Ser Glu Lys Arg Asn Ser Glu Leu Phe Phe Ser Val Leu
GGC GGG CUU GGA CAG UUU GGC AUA AUC ACC CGG GCA CGG AUC UCU
Gly Gly Leu Gly Gin Phe Gly He He Thr Arg Ala Arg He Ser
CUU GAA CCA GCA CCG CAU AUG GUU AAA UGG AUC AGG GUA CUC UAC
Leu Glu Pro Ala Pro His Met Val Lys Trp He Arg Val Leu Tyr
UCU GAC UUU UCU GCA UUU UCA AGG GAC CAA GAA UAU CUG AUU UCA
Ser Asp Phe Ser Ala Phe Ser Arg Asp Gin Glu Tyr Leu He Ser
AAG GAG AAA ACU UUU GAU UAC GUU GAA GGA UUU GUG AUA AUC AAU
Lys Glu Lys Thr Phe Asp Tyr Val Glu Gly Phe Val He He Asn
AGA ACA GAC CUU CUC AAU AAU DGG CGA UCG UCA UUC AGU CCC AAC
Arg Thr Asp Leu Leu Asn Asn Trp Arg Ser Ser Phe Ser Pro Asn
GAU UCC ACA CAG GCA AGC AGA UUC AAG UCA GAU GGG AAA ACU CUU
Asp Ser Thr Gin Ala Ser Arg Phe Lys Ser Asp Gly Lys Thr Leu
UAU UGC CUA GAA GUG GUC AAA UAU UUC AAC CCA GAA GAA GCU AGC
Tyr Cys Leu Glu Val Val Lys Tyr Phe Asn Pro Glu Glu Ala Ser
DCU AUG GAU CAG GAA ACU GGC AAG UUA CUU UCA GAG UUA AAU UAU
Ser Met Asp Gin Glu Thr Gly Lys Leu Leu Ser Glu Leu Asn Tyr
AUU CCA UCC ACU UUG UUU UCA UCU GAA GUG CCA UAU AUC GAG UUU
He Pro Ser Thr Leu Phe Ser Ser Glu Val Pro Tyr He Glu Phe
CUG GAU CGC GUG CAU AUC GCA GAG AGA AAA CUA AGA GCA AAG GGU
Leu Asp Arg Val His He Ala Glu Arg Lys Leu Arg Ala Lys Gly
UUA UGG GAG GUU CCA CAU CCC UGG CUG AAU CUC CUG AUU CCU AAG
Leu Trp Glu Val Pro His Pro Trp Leu Asn Leu Leu He Pro Lys AGC AGC AUA DAC CAA UUU GCU A A GAA GUU UOC AAC AAC AUU CUC
Ser Ser lie Tyr Gin Phe Ala Thr Glu Val Phe Asn Asn lie Leu
ACA AGC AAC AAC AAC GGU CCU AOC COD AUU UAU CCA GUC AAU CAA
Thr Ser Asn Asn Asn Gly Pro lie Leu lie Tyr Pro Val Asn Gin
UCC AAG UGG AAG AAA CAU ACA UCU UUG AUA ACU CCA AAU GAA GAU
Ser Lys Trp Lys Lys His Thr Ser Leu lie Thr Pro Asn Glu Asp
AUA UUC UAU CUC GUA GCC UUU CUC CCC UCU GCA GUG CCA AAU UCC
lie Phe Tyr Leu Val Ala Phe Leu Pro Ser Ala Val Pro Asn Ser
UCA GGG AAA AAC GAU CUU GAG UAC CUU UUG AAA CAA AAC CAA AGA
Ser Gly Lys Asn Asp Leu Glu Tyr Leu Leu Lys Gin Asn Gin Arg
GUU AUG AAC UUC UGC GCA GCA GCA AAC CUC AAC GUG AAG CAG UAU
Val Met Asn Phe Cys Ala Ala Ala Asn Leu Asn Val Lys Gin Tyr
UUG CCC CAU UAU GAA ACU CAA AAA GAG UGG AAA UCA CAC UUU GGC
Leu Pro His Tyr Glu Thr Gin Lys Glu Trp Lys Ser His Phe Gly
AAA AGA UGG GAA ACA UUU GCA CAG AGG AAA CAA GCC UAC GAC CCU
Lys Arg Trp Glu Thr Phe Ala Gin Arg Lys Gin Ala Tyr Asp Pro
CUA GCG AUU CUA GCA CCU GGC CAA AGA AUA UUC CAA AAG ACA ACA
Leu Ala lie Leu Ala Pro Gly Gin Arg He Phe Gin Lys Thr Thr
GGA AAA UUA UCU CCC AUC CAA CUC GCA AAG UCA AAG GCA ACA GGA
Gly Lys Leu Ser Pro He Gin Leu Ala Lys Ser Lys Ala Thr Gly
AGU CCU CAA AGG UAU CAU UAC GCA UCA AUA CUG CCG AAA CCU AGA
Ser Pro Gin Arg Tyr His Tyr Ala Ser He Leu Pro Lys Pro Arg
ACU GUA UAA
Thr Val End
In yet another preferred embodiment, the expression cassette contains: β-glucosidase promoter: :AtCKXl cytosolic::NOS terminator, and it has the sequence with at least 80% identity, preferably at least 90% identity, more preferably at least 95% identity, to the sequence SEQ ID NO. 6. SEQ ID NO.6:
Positions of the individual functional sections:
β-glucosidase promoter : 68 bp - 968 bp
AtCKXl (excluding the signal sequence): 999 bp - 2615 bp
NOS terminator: 2643 bp - 2896 bp I ! f ! I I I I I I I I I I I I I I I I
....I I I I .... I I f I i I I I I I I I I I ! I
.... I ] I I I I I I I I I .... I .... I .... I I I I I I I
.... [....I ....]....( ....I.... I .... |....| ....I.... I .... |...,| ..,.|....| .... I .... I .... I.... I ....I....I
....I....I .... J .... I ....I..., I ,...|.... I ....I,... I
I 1 ] 1 I I I I ...,|....| .,..|....| ....I I I I I I I I I I f I I I I I I I ! ! I I I I I I
....[.... I ...,|....| .... ! .... I .... I .... I ..-. I .... I ....I.... I .... I .... I ...,Ι.,,.Ι ....I, ...I
I I I I I I ! I I 1 1 I I I I I i f j I
....I I ....I I I 1 I I I I [ ( I I ! f I I I ! 1410 1420 1430 1440 1450 1460 1470 1430 1490 1500
CGCGAGACTC TAAAATACGG TCTTTCACCA AAGTCCTGGA CAGACTACCI TCATTTGACC GTTGGAGGTA CACTATCTAA TGCTGGAAIC AGCGGTCAAG
— I— [ — I— I — I— I — I— I — I— I — I— I .... I— [ — I— I — I— I — I— I
1510 1520 1530 1540 1550 1560 1570 1580 1590 1600
CATTCAAGCA TGGACCCCAA ATCAACAACG ICTACCAGCT AGAGATTGTT ACAGGGAAAG GAGAAGTCGT AACCTGTTCT GAGAAGCGGA ACTCTGAACT
....I.... I ....|.... I .... ! .... I ....I....I ....I.... I ....I.... I ....I.... I ....|....I ...,|....I
1610 1620 1630 1640 1650 1660 1670 1680 1690 1700
TTTCTTCAGT GTTCTTGGCG GGCTTGGACA GTTTGGCATA ATCACCCGGG CACGGATCTC TCTTGAACCA GCACCGCATA IGGTTAAATG GATCAGGGIA
I.... I ....I I I I I I ....I....I I I I I I I I .... I I
1710 1720 1730 1740 1750 1760 1770 1780 1790 1800
CTCTACTCTG ACTTTTCTGC ATTTTCAAGG GACCAAGAAT ATCTGATTTC AAAGGAGAAA ACTTTTGATT ACGTTGAAGG ATTTGTGATA ATCAATAGAA I I I I I I ....I I I I I I I I .... I .... I
1810 1820 1830 1B40 1B50 1860 1870 1880 1890 1900
CAGACCTTCT CAATAATTGG CGATCGICAT TCAGTCCCAA CGATTCCACA CAGGAAGCA GATTCAAGTC AGATGGGAAA ACTCTTTATT GCCTAGAAGT
....I.... I .... I .... I ....I.... I ,...|....| ...,|....I ....|....I
1910 1920 1930 1940 1950 1960 1970 1380 1990 2000
GGTCAAAIAT TTCAACCCAG AAGAAGCTAG CTCTATGGAT CAGGAAACTG GCAAGTTAC1 TICAGAGITA AATTATATTC CATCCACTTT GTTTTCATCT I I I I I I ....I.... I I I I I
2010 2020 2030 2040 2050 2060 2070 2080 2090 2100
GAAG1GCCAI ATATCGAGIT TCTCGATCGC GTGCATATCG CAGAGAGAAA ACTAAEAGCA AAGGGTTTAT GGGAGGTTCC ACATCCCTGG CTGAATCTCC
....I.... I ....I.... I ....|.... I ....).... I .. . . I . . . . I ....!....! I I . . . . I ....I ....!....(
2110 2120 2130 2140 2150 2160 2170 2180 2190 2200
TGATTCCTAA GAGCAGCATA TACCAATTTG CTACAGAAGT TTTCAACAAC ATTCTCACAA GCAACAACAA CGGTCCTATC CTTATTTATC CAGTCAATCA
.... I .... I ....|....I .... I .... j ....I.... I . I .... I ....(....! ....I....I
2210 2220 2230 2240 2250 2260 2270 2280 2290 2300
ATCCAAGTGG AAGAAACATA CATCTTTGAI AACTCCARAT GAAGATATAT TCTATCTCGT AGCCTTTCTC CCCTCIGCAG TGCCAAATTC CTCAGGGAAA
! ! I I I I f t ! I I I I I I I I I I
2310 2320 2330 2340 2350 2360 2370 2380 2390 2400
AACGATCTTG AGTACCTTTT GAAACAAAAC CAAAGAGTTA TGAACTTCTG CGCAGCAGCA AACCTCAACG TGAAGCAGIA TTTGCCCCAT TATGAAACTC I I I I I I I ! I I I ....I I I I 1 I I I
2410 2420 2430 2440 2450 2460 2470 2480 2490 2500
AAAAAGAGTG GAAATCACAC TTTGGCAAAA GATGGGAAAC ATTTGCACAG AGGAAACAAG CCTACGACCC TCTAGCGATI CTAGCACCTG GCCAAAGAAT I I t I I .... I I I ! ] I I I.... I ....I I ! [ ] I
2510 2520 2530 2540 2550 2560 2570 2580 2590 2600
ATTCCAAAAG ACAACAGGAA AATTATCTCC CAICCAACTC GCAAAGTCAA AGGCAACAGG AAGTCCTCAA AGGTATCATT ACGCATCAAT ACTGCCGAAA
2610 2620 2630 2640 2650 2660 2670 2680 2690 2700
CCTAGAACTG TATAAGTCOA CTCGAGTCTA GAAGTCGAAG CAGATCGTTC AAACATTTGG CAATAAAGTT TCTTAAGATT GAATCCTGTT GCCGGTCTTG
....I....I ....I,,.. I .... I .... I ....I.... I ....I,... I , . . . | . . . . t . . . . J . . . . I .... .... ! ....I.... I .... I .... I
2710 2720 2730 2740 2750 2760 2770 2780 2790 2800
CGATGATTAT CATATAATTT CTGTIGAATT ACGTTAAGCA TGTAATAATT AACATGTAAT GCATGACGTT ATTTATGAGA TGGGTTTTTA TGATTAGAGT
.... I .... I ..-.I I I I I I I I I 1 i I I t I I I I
2810 2B20 2830 2840 2850 2860 2870 2880 2890 2900
CCCGCAATTA TACATTTAAT ACGCGATAGA AAACAAAATA TAGCGCGCAA ACTAGGATAA ATTATCGCGC GCGSTGTCAT CTATGTTACT AGATCGACCG
.... I .... I I I I I I I I ! I I I I I I t I I I
2910 2920 2930 2940 2950 2960 2970 2980 2990 3000
GCAAGCAAGC TGATATGCGG CCGCACTCGA GATATCTAGA CCCAGCTTTC TTGTACAAAG TGGTTGATGG GCTGCAGGAA TTCGATATCA AGCTTATCGA 3010 3020 3030 3040
TACCGTCGAC CTCGAGGGGG ATCACCACTT TGTACAAGAA AGCTG
Protein AtCKXl cytosolic (538 amino-acids, SEQ ID NO. 9)
AAU CAU UCU GUU AGU ACC CCA AAA GAA UUA CCU UCU UCA AAU CCU
Asn His Ser Val Ser Thr Pro Lys Glu Leu Pro Ser Ser Asn Pro
UCA GAU AUU CGU UCC UCA UUA GUU UCA CUA GAU UUG GAG GGU UAU
Ser Asp lie Arg Ser Ser Leu Val Ser Leu Asp Leu Glu Gly Tyr
AUA AGC UUC GAC GAU GUC CAC AAU GUG GCC AAG GAC UUU GGC AAC
lie Ser Phe Asp Asp Val His Asn Val Ala Lys Asp Phe Gly Asn
AGA UAC CAG UUA CCA CCU UUG GCA AUU CUA CAU CCA AGG UCA GUU
Arg Tyr Gin Leu Pro Pro Leu Ala He Leu His Pro Arg Ser Val
UUU GAU AUU UCA UCG AUG AUG AAG CAU AUA GUA CAU CUG GGC UCC
Phe Asp He Ser Ser Met Met Lys His He Val His Leu Gly Ser
ACC UCA AAU CUU ACA GUA GCA GCU AGA GGC CAU GGU CAC UCG CUU
Thr Ser Asn Leu Thr Val Ala Ala Arg Gly His Gly His Ser Leu
CAA GGA CAA GCU CUA GCU CAU CAA GGU GUU GUC AUC AAA AUG GAG
Gin Gly Gin Ala Leu Ala His Gin Gly Val Val He Lys Met Glu
UCA CUA CGA AGU CCU GAU AUU AGG AUU UAU AAG GGG AAG CAA CCA
Ser Leu Arg Ser Pro Asp He Arg He Tyr Lys Gly Lys Gin Pro
UAU GUU GAU GUC UCA GGU GGU GAA AUA UGG AUA AAC AUU CUA CGC
Tyr Val Asp Val Ser Gly Gly Glu He Trp He Asn He Leu Arg
GAG ACU CUA AAA UAC GGU CUU UCA CCA AAG UCC UGG ACA GAC UAC
Glu Thr Leu Lys Tyr Gly Leu Ser Pro Lys Ser Trp Thr Asp Tyr
CUU CAU UUG ACC GUU GGA GGU ACA CUA UCU AAU GCU GGA AUC AGC
Leu His Leu Thr Val Gly Gly Thr Leu Ser Asn Ala Gly He Ser
GGU CAA GCA UUC AAG CAU GGA CCC CAA AUC AAC AAC GUC UAC CAG
Gly Gin Ala Phe Lys His Gly Pro Gin He Asn Asn Val Tyr Gin
CUA GAG AUU GUU ACA GGG AAA GGA GAA GUC GUA ACC UGO UCU GAG
Leu Glu He Val Thr Gly Lys Gly Glu Val Val Thr Cys Ser Glu AAG CGG AAC UCU GAA CUU UUC UUC AGU GUU CUU GGC GGG CUU GGA Lys Arg Asn Ser Glu Leu Phe Phe Ser Val Leu Gly Gly Leu Gly CAG UUU GGC ADA AUC ACC CGG GCA CGG AUC UCU CUD GAA CCA GCA
Gin Phe Gly He He Thr Arg Ala Arg He Ser Leu Glu Pro Ala
CCG CAO AUG GUU AAA UGG AUC AGG GUA CUC UAC UCU GAC UUU UCU
Pro His Met Val Lys Trp He Arg Val Leu Tyr Ser Asp Phe Ser
GCA UUU UCA AGG GAC CAA GAA UAU CUG AUU UCA AAG GAG AAA ACU
Ala Phe Ser Arg Asp Gin Glu Tyr Leu He Ser Lys Glu Lys Thr
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Phe Asp Tyr Val Glu Gly Phe Val He He Asn Arg Thr Asp Leu
CUC AAU AAU UGG CGA UCG UCA UUC AGU CCC AAC GAU UCC ACA CAG
Leu Asn Asn Trp Arg Ser Ser Phe Ser Pro Asn Asp Ser Thr Gin
GCA AGC AGA UUC AAG UCA GAU GGG AAA ACU CUU UAU UGC CUA GAA
Ala Ser Arg Phe Lys Ser Asp Gly Lys Thr Leu Tyr Cys Leu Glu
GUG GUC AAA UAU UUC AAC CCA GAA GAA GCU AGC UCU AUG GAU CAG
Val Val Lys Tyr Phe Asn Pro Glu Glu Ala Ser Ser Met Asp Gin
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DUG UUU UCA UCU GAA GUG CCA UAU AUC GAG UUU CUG GAU CGC GUG
Leu Phe Ser Ser Glu Val Pro Tyr He Glu Phe Leu Asp Arg Val
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His He Ala Glu Arg Lys Leu Arg Ala Lys Gly Leu Trp Glu Val
CCA CAU CCC UGG CUG AAU CUC CUG AUU CCU AAG AGC AGC AUA UAC
Pro His Pro Trp Leu Asn Leu Leu He Pro Lys Ser Ser He Tyr
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Gin Phe Ala Thr Glu Val Phe Asn Asn He Leu Thr Ser Asn Asn
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Val Ala Phe Leu Pro Ser Ala Val Pro Asn Ser Ser Gly Lys Asn GAU CDU GAG UAC CUU OUG AAA CAA AAC CAA AGA GUD AUG AAC UUC
Asp Leu Glu Tyr Leu Leu Lys Gin Asn Gin Arg Val Met Asn Phe
OGC GCA GCA GCA AAC CUC AAC GUG AAG CAG UAU UUG CCC CAU UAU
Cys Ala Ala Ala Asn Leu Asn Val Lys Gin Tyr Leu Pro His Tyr
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Glu Thr Gin Lys Glu Trp Lys Ser His Phe Gly Lys Arg Trp Glu
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Thr Phe Ala Gin Arg Lys Gin Ala Tyr Asp Pro Leu Ala lie Leu
GCA CCU GGC CAA AGA AUA UUC CAA AAG ACA ACA GGA AAA UUA UCU
Ala Pro Gly Gin Arg He Phe Gin Lys Thr Thr Gly Lys Leu Ser
CCC AUC CAA CUC GCA AAG UCA AAG GCA ACA GGA AGU CCU CAA AGG
Pro He Gin Leu Ala Lys Ser Lys Ala Thr Gly Ser Pro Gin Arg UAU CAU UAC GCA UCA AUA CUG CCG AAA CCU AGA ACU GUA UAA
Tyr His Tyr Ala Ser He Leu Pro Lys Pro Arg Thr Val End
Subject of the present invention is further the use of the above-mentioned expression cassettes for the preparation of barley plants showing the resistance to drought.
Brief description of Drawings
Fig. 1: Phenotype of the plants with overexpression of ZmCKXl under the β-glukosidase promoter. 1. Control WT barley, 2., 3. and 4. genetically modified lines of barley.
Fig. 2: Number of AtCKXl transcripts in 1 ng RNA at 1, 2, 5, 8 and 14 weeks old transgenic plants.
Fig. 3: Determining the relative contents of water in leaves in 3-months old plants of barley, of which half of the plants were stressed for 2 months by drought. Transgenic plants contain vacuolar form of AtCKXl . Flag leaves were taken from five plants from the oldest stem after being exposed to drought for the miiiimum of 24 hours.
Fig. 4: Photo documentation of the effect of drought stress to transgenic and control WT barley plants. A) WT barley, B) transgenic barley with vacuolar AtCKXl.
Fig. 5: Photo documentation of the effect of drought stress to transgenic and control WT plants of barley. A) WT barley, B) transgenic barley with apoplastic AtCKXl . Fig. 6: Photo documentation of the effect of drought stress to transgenic and control WT of the plants of barley. A) WT barley, B) transgenic barley with cytosolic AtCKXl.
Examples of carrying out the Invention
Example 1: Preparation of genetically modified barley
1. Preparation of binary construct for introduction of foreign DNA to barley
3 constructs with vacuolar cytosolic or apoplastic AtCKXl form were prepared (originally from the plant Arabidopsis thali na). Each construct contains regulation sequences - β-glukosidase gene promoter and NOS terminator. The majority of functional segments was synthesized by a commercial company Mr. Gene GmbH (Regensburg, Germany): the sequence of β-glukosidase gene promoter (Gu et al. (2006), Plant Cell Rep. 25:1157-65), the AtCKXl gene (Kowalska et al. (2010), Phytochemistry. 71:1970-8) with artificially created restriction site for cleavage of the signal sequence, the signal secretion sequence of the AtCKX2 gene (Werner et al. (2003), Plant Cell. 15:2532-50) and the NOS terminator (Bevan M, Barnes WM, Chilton MD. (1983), Nucleic Acids Res. 11 :369-85). Further DNA fragments introduced to barley were acquired by purchasing binary T-DNA plasmid pBRACT209 (John Innes Centre, Norwich, Great Britain) and a plasmid construct with natural form of AtCKXl was obtained from Dr. T. Werner (Freie Universitat Berlin, Germany), the preparation of which is shown in Werner et al. (2001), Proc Natl Acad Sci USA. 98:10487-92.
The functional segments were - using the restriction endonucleases and T4-DNA ligase (Sarabrook J, Russell DW Molecular cloning: A Laboratory Manual (third ed.), 3:A2.2, Cold Spring Harbor, New York 2001) - introduced into the vector pENTRl A (purchased from the company Invitrogen, Life Technologies Czech Republic s.r.o., Prague), which serves as a donor vector for introduction of the required DNA fragment to the target vector pBRACT209 using the so-called Gateway cloning (performed according to the instructions of the company Invitrogen). The resulting constructs were verified by commercial sequencing and used for the transformation of the bacteria Agrobacterium tumefaciens (strain AGL1), which was obtained from Plant Breeding and Acclimatization Institute (Blonie, Poland). Transformation of A. tumefaciens was carried out according to the protocol shown in the Sambrook J, Russell DW Molecular cloning: A Laboratory Manual (third ed.), 3:A2.2, Cold Spring Harbor, New York 2001.
2. Transformation of barley using Agrobacterium tumefaciens
Transformation of barley using Agrobacterium tumefaciens was performed according to published procedure shown in Harwood et al. (2009), In Methods in Molecular Biology, Vol. 478 Transgenic Wheat, Barley and Oats (Jones H. D, Shewry P. R. ed.), pp. 137-147, Humana Press, New York, USA. The only modifications consisted in the use of 0.2 mM acetosyringone in agrobacterial suspension before the actual infection of the donor material, which were barley scutella. Further modification was the addition of 6- benzylaminopurine into the regeneration medium (0.4 mg/1 medium) to ensure a sufficient level of cytoki ins in the regenerating plants.
3. Growing transgenic barley
After approximately thirty days of growing in the basic medium (Harwood et al. (2009), In Methods in Molecular Biology, Vol. 478 Transgenic Wheat, Barley and Oats (Jones H. D, Shewry P. R. ed.), pp. 137-147, Humana Press, New York, USA), the plants were moved to peat discs and were grown for one week in phytotron (16-hour-day - 15 °C / 8- hour-night - 12 °C; illumination 300 μΜ/ιη 2 /3 on the level of the growing vessel). In the end, the plants were replanted to a mixture of soil : commercial substrate : perlite (ratio 1:1:1) and grown in the phyto chamber under the same conditions until the stage of maturity.
In the Tl generation of transgenic barley, the lines with one integration of T-DNA were selected, in which the presence of functional transgene was confirmed and verified on the level of gDNA, RNA and protein level. In the T2 generation, homo2ygotic lines of transgenic barley were selected and then further characterized and studied.
4. Study of expression of AtCKXl driven by β-ghikosidase promoter and study of the expression of 35S::hpt
The number of transcripts of AtCKXl was detected in 1 ng of RNA for 1, 2, 5, 8 and 14- week old transgenic barley plants with AtCKXl vacuolar. The number of transcripts of hpt was detected in 1 ng of RNA for 1 , 2, 5 and 8-week old transgenic barley plants with AtCKXl vacuolar. Quantification was performed using calibration curves, for the preparation of which clean plasmids with the corresponding genes in a known concentration were used, by means of Sybr green qPCR (StepOnePlus™ Real-Time PCR System, Life Technologies Czech Republic s.r.o., Prague). Primers were designed using the program Primer Express 3.0. As endogenic control, the genes for β-actin, barley cyclophilin and elongation factor 1 were used.
High-quality RNA was isolated using the RNAqueous® kit (Ambion, Life Technologies Czech Republic s.r.o., Prague), treated by Turbo DNAse (Life Technologies Czech Republic s.r.o., Prague), and purified using magnetic balls (Agencourt RNA-CLEAN XP, Beckman Coulter, Prague). Transcription to cDNA followed, using the reversion transcriptase RevertAid H Minus M-MULV (ThermoFischer SCIENTIFIC, Pardubice).
To confirm the integration of the required functional cassette to the barley genome and thus also to confirm the genetic modification of the plants, the selection hpt gene was monitored on the genome level as well as on the RNA level. In all transgenic plants, the presence and the transcription of the monitored hpt gene was confirmed (Tab. 1), which is under the 35S promoter (part of the binary vector pBRACT209).
Table 1 : Number of hpt transcripts in 1 ng of RNA in 1, 2, 5 and 8-week old transgenic plants.
For the quantification of expression of AtCKXl controlled by β-glukosidase promoter, the number of AtCKXl transcripts in 1 ng of RNA was determined in the aerial part and in the roots in 1, 2, 5, 8, and 14/16-week old transgenic barley plants (Fig. 2). The strongest expression was observed in 4-week old plants, in the roots of barley. In comparison with the expression driven by 35S promoter (Tab. 1), which is considered as moderate promoter for use in the cereals, we can consider the β-glucosidase promoter as a weak promoter for the expression of the target gene in monocotyledonous plants. Example 2: Application of drought stress
A. Drought stress was applied on 3 -month old plants that were grown in a greenhouse in 1 kg of homogenous mixture of soil and perlite in the ratio 2:1. The soil was allowed to dry out in regular intervals, which corresponded to 1 to 3 waterings of 200 ml per 1 kg of soil per week, depending on the age of the plant and temperature conditions. The unstressed plants were watered every day. 30 transgenic barley plants with vacuolar form of AtCKXl and 30 control WT were stressed. In the 3-month old plants the relative water content ( WC) was determined in the six youngest, however fully developed leaves for the tested line (Turner NC, Abbo S, Berger JD, Chaturvedi SK, French RJ, Ludwig C, Mannur DM, Singh SJ, Yadava HS. (2007) J Exp Bot. 58:187-94).
B. Study of effects of the stress to 4-week old, hydroponically grown barley plants growing in the phytotron (16 hours day - 23 °C / 8 hours night - 20 °C; illumination 100 μΜ/ιη 2 /8 on the level of the growing vessel, 300 μΜ/ιη 2 /3 on the level of the growth apex of the 6-week old plants). The stress was applied by pouring the nutrient medium off the growing vessel (Hoagland DR and Arnon DI. (1950), California Agricultural Experiment Station Circular 347:1-32), slight dripping off and returning the plants to the vessel, where they were further grown for 24 hours. During this time, the leaves were regularly collected (always 5 per one line of barley) to determine the relative water contents, and photo documentation of the stressed plants was further performed.
C. Study of effects of the stress to 4-week old barley plants that were grown in a minimum quantity of soil in phytotron (16 hours day - 22 °C / 8 hours night - 20 °C; illumination 150 μΜ/ηι 2 /8) to evaluate the capability of revitalization of the genetically modified plants. The plants were left for 2 days without watering. The measurement of relative water content in the leaves confirmed a strong stress by drought. The control of revitalization took place 24 hours from the renewal of watering by leaf collection (always 5 leaves per one line of barley) to determine the relative water content.
A. Increased resistance of transgenic plants of barley grown in 1 kg of growing substrate, long-term exposed to drought stress.
Transgenic plants with vacuolar form of AtCKXl were grown in 1 kg of growing substrate in a greenhouse. After two months of drought, flag leaves of the grown plants were taken to determine the relative water contents. It was determined that compared to the control WT plants, the transgenic plants have by more than 10% higher water contents during the application of long-term stress (Fig. 3). Compared to the control conditions (i.e. without application of stress), it is apparent that no significant reduction of water in the leaves (Fig. 3) occurred during the stress in the genetically modified plants, in contrast to WT barley plants.
B. Increased resistance to drought stress in hydroponically grown plants
The plants of barley (transgenic lines and WT barley) were hydroponically grown in Hoagland nutrient solution to ensure optimum uptake of nutrients and water through the roots, which is ideal for determining the studied parameters (RWC, total dry mass of the leaves and roots after the two- week long regeneration of plants) during the drought stress and revitalization. During the experiment, the phenotype of the plants was monitored. Due to a different place of action of ectopically produced C X, different results were obtained for transgenic plants with vacuolar, cytosolic, or apoplastic CKX.
Barley with AtCKXl vacuolar
During the stress and revitalization of the hydroponically grown plants, increase of RWC was not observed, compared to WT barley. After the two-week regeneration, the transgenic plants had the weight of the aerial part increased by 32% compared to WT, which was given by a higher number of tillers. From the phenotypic point of view, faster regeneration is apparent in the transgenic plants already after 4 hours of revitalization (Fig.4).
Barley with AtCKXl apoplastic
During the stress of the hydroponically grown plants, an increase of RWC by up to 19% was detected after 20 hours without growth medium compared to the control WT plants; after 24 hours of stress by up to 12% higher RWC compared to WT barley. The weight of the aerial part or roots was not higher after the application of stress than in the stressed WT plants. From the point of phenotype, there is an apparent resistance of the transgenic plants during the stress as well as faster regeneration of these plants compared to the WT barley (Fig. 5).
Barley with AtCKXl cytosolic
During the two-hour revitalization of the hydroponically grown plants the relative water content detected in leaves was higher by 18% than in the control WT plants. After the two-week regeneration of the plants, the transgenic plants had by 17 % higher mass of the aerial part and by 17% higher mass of the roots than WT. The number of tillers was comparable to the WT barley, the plants were higher. From the point of phenotype, a higher resistance of transgenic plants to the stress is apparent during the entire 24 hours, and fast revitalization already after 2 hours after addition of nutrient medium to the plants (Fig. 6).
C. Increased revitalization capability of transgenic plants of barley grown in a minimum quantity of the growing substrate
Transgenic plants with vacuolar, cytosolic, or apoplastic form of AtCKXl were grown in a minimum quantity of the growing substrate in phytotron. After the application of drought (termination of watering) and during revitalization (restoration of watering), the youngest, however fully developed leaves of the plants were taken to determine the relative water contents. With respect to the fact that the plants were growing only in a limited quantity of soil thus being considerably spatially and nutritionally limited, they could not fully utilize their potential during the stress. This experiment was thus focused on the capability of revitalization of the genetically modified plants after previous application and confirmation of drought stress. After the watering was restored, the transgenic plants showed, compared to WT barley, a significantly faster revitalization of the aerial part of the plants (Tab. 3). The line with cytosolic AtCKXl was confirmed to have by 25% higher water contents in the leaves than the WT barley. In the plants with apoplastic AtCKXl, the RWC was by 17% higher; in the line with vacuolar AtCKXl, the value of RWC was by 15% higher than in the WT barley. Transgenic plants with ectopically overexpressed AtCKXl thus had a higher capability to quickly deliver the necessary amount of water to the aerial parts of the plant in the environment with sufficient quantity of watering.
Table 3: Determining Relative Water Contents (RWC) in the leaves during revitalization of transgenic and WT barley plants after the application of drought stress.
Barley line RWC in % during 24-hour revitaiization
WT 78
AtCKXl Cytosolic 98 Barley line RWC in % during 24-hour revitalization
AtCKXl Apoplastic 92
AtCKXl Vacuolar 90