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Title:
MICROFLUIDIC PROBE HEAD FOR PROCESSING A SEQUENCE OF LIQUID VOLUMES SEPARATED BY SPACERS
Document Type and Number:
WIPO Patent Application WO/2016/128543
Kind Code:
A1
Abstract:
A microfluidic probe head for processing a sequence of separate liquid volumes separated by spacers, the microfluidic probe head comprising: an inlet and an outlet, a first fluid channel and a second fluid channel, and a fluid bypass connecting the first fluid channel and the second fluid channel to each other, wherein, the first fluid channel is configured for delivering the sequence of separate liquid volumes from the inlet toward a deposition area, the fluid bypass connects the first fluid channel and the second fluid channel, to allow the spacers to be removed from the first fluid channel and thereby obtain a free sequence of separate liquid volumes, without spacers, the first fluid channel is configured for delivering the free sequence of separate liquid volumes to the deposition area, and the second fluid channel is configured for delivering the removed spacers from the fluid bypass to the outlet.

Inventors:
AUTEBERT JULIEN (CH)
DELAMARCHE EMMANUEL (CH)
KAIGALA GOVIND (CH)
VAN KOOTEN XANDER FRANK (CH)
Application Number:
PCT/EP2016/052995
Publication Date:
August 18, 2016
Filing Date:
February 12, 2016
Export Citation:
Click for automatic bibliography generation   Help
Assignee:
IBM (US)
IBM RES GMBH (CH)
International Classes:
B01L3/02; B01L3/00; G01N35/10
Domestic Patent References:
WO2012056369A12012-05-03
WO2011067670A22011-06-09
Foreign References:
US20070039866A12007-02-22
DE102010032203A12012-01-26
Attorney, Agent or Firm:
KLETT, Peter (8803 Rueschlikon, CH)
Download PDF:
Claims:
CLAIMS

1. A micro fluidic probe head for processing a sequence of separate liquid volumes separated by spacers, the microfluidic probe head comprising:

an inlet and an outlet,

a first fluid channel and a second fluid channel, and

a fluid bypass connecting the first fluid channel and the second fluid channel to each other,

wherein,

the first fluid channel is configured for delivering the sequence of separate liquid volumes from the inlet toward a deposition area,

the fluid bypass connects the first fluid channel and the second fluid channel, to allow the spacers to be removed from the first fluid channel and thereby obtain a free sequence of separate liquid volumes, without spacers,

the first fluid channel is configured for delivering the free sequence of separate liquid volumes to the deposition area, and

the second fluid channel is configured for delivering the removed spacers from the fluid bypass to the outlet.

2. The microfluidic probe head of claim 1,

wherein a spacer separating two subsequent separate liquid volumes of the sequence of separate liquid volumes from each other is immiscible with the separate liquid volumes.

3. The microfluidic probe head of claim 1 or 2,

wherein the second fluid channel is configured for delivering the free sequence of separate liquid volumes from the deposition area to the outlet.

4. The microfluidic probe head of any of claims 1 to 3, further comprising:

a body including the first fluid channel, the second fluid channel and the fluid bypass, the body having and end face configured for immersion in an immersion liquid,

a first aperture formed in the end face and fluidly connected to the first fluid channel, and

a second aperture formed in the end face and fluidly connected to the second fluid channel, wherein,

the fluid bypass connects to the first fluid channel upstream of the first aperture, and the microfluidic probe head is configured for:

delivering the free sequence of separate liquid volumes through the first aperture and the first fluid channel with a first flow rate, and

aspirating the free sequence of separate liquid volumes together with some of the immersion liquid from the deposition area, through the second aperture and the second fluid channel with a second flow rate,

wherein the second flow rate is greater than the first flow rate so as to confine the delivered free sequence of separate liquid volumes within the immersion liquid.

5. The microfluidic probe head of any of claims 1 to 4, further comprising

an additional outlet and a third fluid channel,

wherein the third fluid channel is configured for delivering the free sequence of separate liquid volumes from the deposition area to the additional outlet.

6. The microfluidic probe head of claim 5, further comprising

a body including the first fluid channel, the second fluid channel, the third fluid channel and the fluid bypass, the body having an end face configured for immersion in an immersion liquid,

a first aperture, a second aperture and a third aperture, each formed in the end face and fluidly connected to the first fluid channel, the second fluid channel and the third fluid channel, respectively, and

wherein,

the fluid bypass connects to the first fluid channel upstream of the first aperture, and the microfluidic probe head is configured for:

providing the free sequence of separate liquid volumes through the first aperture and the first fluid channel,

aspirating some of the immersion liquid from the deposition area through the second aperture and the second fluid channel, and

aspirating the free sequence of separate liquid volumes together with some of the immersion liquid from the deposition area through the third aperture and the third fluid channel.

7. The microfluidic probe head of any of claims 1 to 6, further comprising

at least one blocking element for redirecting the spacers from the first fluid channel into the fluid bypass. 8. The microfluidic probe head of any of claims 1 to 7,

wherein the fluid bypass tapers down from the first fluid channel toward the second fluid channel.

9. The microfluidic probe head of any of claims 1 to 8,

wherein the second fluid channel includes a constriction configured for increasing a pressure at a location where the fluid bypass connects fluidly to the second fluid channel.

10. The microfluidic probe head of any of claims 1 to 9, further comprising

a spacer insertion unit for injecting the spacers into the first fluid channel.

11. The microfluidic probe head of any of claims 1 to 10,

wherein the sequence comprises separated volumes of at least one liquid that contains a biochemical substance. 12. The microfluidic probe head of any of claims 1 to 1 1, further comprising

a control unit configured for synchronizing an insertion rate of the spacers into the first fluid channel with an aspiration rate of the spacers into the second fluid channel.

13. A microfluidic probe for processing a sequence of separate liquid volumes separated by spacers, comprising:

the microfluidic probe head of any of claims 1 to 12,

a plurality of liquid supplies fluidly connectable to the inlet of the microfluidic probe head, and

a control unit for selectively fluidly connecting the inlet to one of the plurality of liquid supplies.

14. A method for processing a sequence of separate liquid volumes separated by spacers, comprising: delivering via a first fluid channel the sequence of separate liquid volumes from an inlet toward a deposition area,

removing from the first fluid channel the spacers separating the separate liquid volumes from one another, via a fluid bypass that connects the first fluid channel and a second fluid channel, and thereby obtain a free sequence of separate liquid volumes, without spacers,

delivering the free sequence of separate liquid volumes to the deposition area, and delivering the removed spacers from the fluid bypass to an outlet via the second fluid channel.

15. The method of claim 14, wherein

delivering the sequence of separate liquid volumes, removing the spacers, delivering the free sequence of separate liquid volumes and delivering the removed spacers is carried out using the microfluidic probe head of claim 1.

16. The method of claim 14 or 15, wherein

the sequence of separate liquid volumes delivered via the first fluid channel comprises separate volumes of at least two different liquids.

Description:
MICROFLUIDIC PROBE HEAD FOR PROCESSING A SEQUENCE OF LIQUID VOLUMES SEPARATED BY SPACERS FIELD OF THE INVENTION

The invention relates to a microfluidic probe head, a microfluidic probe comprising this microfluidic probe and a method for processing a sequence of separate liquid volumes separated by spacers.

BACKGROUND

Micro fluidics deals with the behavior, precise control and manipulation of small volumes of fluids that are typically constrained to micrometer-length scale channels and to volumes typically in the sub-milliliter range. Here, fluids refer to liquids and either term may be used interchangeably in the rest of the document. In particular, typical volumes of liquids in micro fluidics range from 10 " 15 L to 10 "5 L and are transported via microchannels with a typical diameter of 10 "7 m to 10 "4 m. At the microscale, the behavior of the liquids can differ from that at a larger, i.e.

macroscopic, scale, such that, in particular, surface tension, viscous energy dissipation and fluidic resistance are dominant characteristics of the flow. For example, the Reynolds number, which compares an effect of momentum of a fluid to the effect of viscosity, can decrease to such an extent that the flow behavior of the fluid becomes laminar rather than turbulent.

In addition, liquids at the microscale do not necessarily mix in the traditional, chaotic sense due to the absence of turbulence in low-Reynolds number flows, and interfacial transport of molecules or small particles between adjacent liquids often takes place through diffusion. As a consequence, certain chemical and physical properties of liquids such as concentration, pH, temperature and shear force are deterministic. This provides more uniform chemical reaction conditions and higher grade products in single and multi-step reactions. A microfluidic probe is a device, in particular microfabricated scanning device, for depositing, retrieving, transporting, delivering, and/or removing liquids, in particular liquids containing chemical and/or biochemical substances. For example, the microfluidic probe can be used on the fields of diagnostic medicine, pathology, pharmacology and various branches of analytical chemistry. Here, the microfluidic probe can be used for performing molecular biology procedures for enzymatic analysis, deoxyribonucleic acid (DNA) analysis and proteomics.

Many of chemical and biochemical processes require multiple steps that are performed sequentially, involving exposure of a target surface to different liquids including in particular (bio)chemicals, solvents and buffers under various conditions including different temperatures, different concentrations and/or different durations.

Accordingly, the microfluidic probe should enable the delivery of a sequence of liquids in small volumes to a surface with low or no mixing between the sequential liquids. During transport of the liquids, these sequential sections of liquids inside a capillary or microfluidic channel are often termed as 'plugs'. Typically, in microfluidic capillaries and channels, mixing between subsequent plugs comprising different liquids due to (Taylor) dispersion decreases the concentration gradient between these subsequent plugs. In order to deliver a sequence of small-volume plugs to a surface, the microfluidic probe should be capable of rapidly switching between different liquids that form a sequence of small- volume plugs. In the meantime, the dispersion of plugs during the delivery to the surface should be limited in order to prevent subsequent plugs from mixing with one another. Microfluidic probe heads are know which are suitable for patterning continuous and discontinuous patterns of biomolecules on surfaces and processing resist materials on a surface. However, liquids that are sequentially delivered to the target surface tend to mix with one another due to advective and diffusive effects. As a result, the sequence of plugs delivered to the surface may no longer be identical in terms of solute or particle

concentration, viscosity and plug volume by the time it reaches the surface as compared to its initial state shortly after the point where the sequence is generated.

One approach to prevent sequentially delivered liquids from mixing with one another is made by inserting spacers of an immiscible-phase fluid between sequential plugs that comprise different continuous-phase liquids. For instance, the sequential plugs could be aqueous, while the immiscible-phase spacers are constituted by an oil or a gas. The immiscible-phase spacers prohibit a diffusion of solutes and/or particles between sequential plugs. "The chemistrode: A droplet-based microfluidic device for stimulation and recording with high temporal, spatial, and chemical resolution", D. Chen et al, PNAS, 2008 (105), 16843 - 16848, discloses a tool that delivers aqueous stimulus plugs separated by segments of an immiscible phase to a target surface and retrieves response plugs. However, the tool and the immiscible-phase spacers come into direct contact with the target surface. A drawback of many prior art solutions is that they are not applicable to local chemistry performed in wet environments, in particular when willing to use hydrodynamic flow confinement. Therefore, the deposition of droplets cannot be localized due to spreading of the liquid using this device and method. BRIEF SUMMARY OF THE INVENTION

According to a first aspect, the invention can be embodied as a microfluidic probe head for processing a sequence of separate liquid volumes separated by spacers. The microfluidic probe head comprises an inlet, an outlet, a first fluid channel and a second fluid channel and a fluid bypass. The fluid bypass connects the first fluid channel and the second fluid channel to each other. The first fluid channel is configured for delivering the sequence of separate liquid volumes from the inlet toward a deposition area. The fluid bypass connects the first fluid channel and the second fluid channel, to allow the spacers to be removed from the first fluid channel and thereby obtain a free sequence of separate liquid volumes, without spacers. The first fluid channel is configured for delivering the free sequence of separate liquid volumes to the deposition area. The second fluid channel is configured for delivering the removed spacers from the fluid bypass to the outlet.

According to a second aspect, the invention can be embodied as a microfluidic probe for processing a sequence of separate liquid volumes separated by spacers. The microfluidic probe comprises the aforementioned microfluidic probe head, a plurality of liquid supplies fluidly connectable to the inlet of the microfluidic probe, and a control unit for selectively fluidly connecting the inlet of the microfluidic probe to one of the plurality of liquid supplies. According to a third aspect, the invention can be embodied as a method for processing a sequence of separate liquid volumes separated by spacers. The method comprises: delivering via a first fluid channel the sequence of separate liquid volumes from a liquid inlet and toward a deposition area, removing from the first fluid channel the spacers separating the separate liquid volumes from one another, via a fluid bypass that connects the first fluid channel and a second fluid channel, and thereby obtain a free sequence of separate liquid volumes, without spacers, delivering the free sequence of separate liquid volumes to the deposition area, and delivering the removed spacers from the fluid bypass to an outlet via the second fluid channel.

BRIEF DESCRIPTION OF THE DRAWINGS

FIG. 1 shows, in a perspective view, a microfluidic probe for performing sequential

chemistry using hydrodynamic flow confinement, the microfluidic probe comprising a microfluidic probe head;

FIG. 2 shows a cross-sectional partial view of a first embodiment of the microfluidic probe head of FIG. 1;

FIG. 3 shows a comprehensive view of the first embodiment of the microfluidic probe head and fluid connections from FIG. 1 ;

FIG. 4 illustrates subsequent operation steps of the microfluidic probe head from FIG. 2;

FIG. 5 shows a comprehensive view of a second embodiment of the microfluidic probe head and the fluid connections from FIG. 1 ;

FIG. 6 illustrates an enlarged detail VI from FIG. 5 ;

FIG. 7 shows, in an enlarged view VII from FIG. 3 or FIG. 6, a portion of a microfluidic probe head in accordance with a further embodiment;

FIG. 8 shows, in an enlarged view VIII from FIG. 3 or FIG. 6, a portion of a microfluidic probe head in accordance with a further embodiment; and FIG. 9 shows, in an enlarged view IX from FIG. 3 or FIG. 6, a portion of a microfluidic probe head in accordance with a further embodiment. Similar or functionally similar elements in the figures have been allocated the same reference signs if not otherwise indicated.

DETAILED DESCRIPTION OF THE EMBODIMENTS FIG. 1 shows a schematic perspective view of a microfluidic probe 1 for performing sequential chemistry using hydrodynamic flow confinement.

The microfluidic probe 1 comprises a microfluidic probe head 2 attached to a robotic arm 3. The robotic arm 3 is configured for positioning the microfluidic probe head 2 at a specific location and, in particular, above each of the deposition areas 4a - 4g. Preferably, the microfluidic probe 1 further integrates an x, y and z positioning stage in order to perform an arbitrary three-dimensional movement. In particular, the microfluidic probe 1 is configured for performing sequential chemistry. The microfluidic probe head 2 is fluidly connected to liquid supplies 5a - 5c, a spacer supply 6 and a disposal unit 7. The liquid supplies 5a - 5c provide the microfluidic probe head 2 with different liquids, in particular liquids that contain biochemical substances. The spacer supply 6 supplies the microfluidic probe head 2 with oil. The disposal unit 7 collects waste fluids from the microfluidic probe head 2.

FIG. 2 shows a partial view of a first embodiment of the microfluidic probe head 2 illustrating the fluid flows and the formation of hydrodynamic flow confinement.

Generally speaking, hydrodynamic flow confinement (HFC) relates to a phenomenon that a laminar flow of an injection liquid is spatially confined within a liquid bath containing a background liquid. Embodiments of the invention may advantageously rely on hydrodynamic flow confinement, as discussed in detail below. For the sake of illustration, embodiments discussed herein mostly assume hydrodynamic flow confinement. For instance, in the embodiment of FIG. 2, an injection microchannel injects the injection liquid into the liquid bath with an injection flow rate and an aspiration microchannel aspirates the injection liquid and some of the background liquid with an aspiration flow rate. By keeping the aspiration flow rate higher than the injection rate, the laminar flow of the injection liquid from the injection channel to the aspiration channel is formed and confined inside a volume within the surrounding liquid bath.

In the embodiment of FIG. 2, the deposition areas 4a - 4c are located on top of a bottom surface 8 of a Petri dish 9 or the like that is at least partly filled with an immersion liquid 10 such that the deposition areas 4a - 4c are covered with the immersion liquid 10. For example, the deposition areas 4a - 4c may comprise biological and biochemical substances, such as cells or tissue, and/or a device (e.g. a chip) to detect viral and/or bacterial infections or allergies.

The microfluidic probe head 2 comprises a body 11 having an end face 12. A first fluid channel 13 and a second fluid channel 14 are formed in the body 1 1. A first aperture 15 and a second aperture 16 are formed in the end face 12. The first and second apertures 15, 16 are fluidly connected to the first and second fluid channels 13, 14, respectively. For example, a distance Ti between the first and second apertures 15, 16 is less than 2.0 mm, preferably less than 1.5 mm and more preferably less than 1.0 mm.

The body 11 of the microfluidic probe head 2 acts as housing or carrier. All elements, parts and/or devices integrated in the body 11 may be manufactured on-chip (using lithography, for example) and are movable therewith. A fluid bypass 17 is located inside the body 11. The fluid bypass 17 is fluidly connected to the first fluid channel 13 at a first bypass junction 18 and to the second fluid channel 14 at a second bypass junction 19 so as to connect the first fluid channel 13 and the second fluid channel 14. The microfluidic probe head 2 is positioned above the deposition area 4b in FIG. 2. The end face 12 of the microfluidic probe head 2 is spaced from the deposition area 4b such that a distance between the end face 12 and the deposition area 4b is 1 - 100 μιη, preferably 1.5 - 90 μιη and more preferably 2 - 80 μιη. At this distance, the end face 12 is immersed in the immersion fluid 10 covering the deposition areas 4a - 4c. A sequence of separate liquid volumes, including liquid volumes 23a, 23b, separated by spacers 20 is delivered via the first fluid channel 13 to the first bypass junction 18, where blocking elements 21 redirect the spacers 20 into the fluid bypass 17. If the spacers 20, in particular spacers that comprise an oil-phase, come into contact with the deposition area 4a - 4c, surface properties of the deposition area 4a - 4c can be altered and the deposition areas 4a - 4c can be contaminated and the stability of the hydrodynamic flow confinement can be disrupted, thereby disturbing the deposition of the liquid volumes at the required deposition areas 4a - 4c. In particular, biochemical substances such as proteins, cells and biological tissues on the deposition areas 4a - 4c might be denatured and/or damaged by coming in contact with the spacers 20. On the other hand, lipophilic analytes such as lipids, therapeutic molecules, hormones, non-polar dyes or tracers may be carried away by the spacers 20. Furthermore, if the spacers 20 that are discharged through the first aperture 15 they may exert a shear stress on objects below and thereby damage and/or shift them.

By removing the spacers 20 that separate the liquid volumes 23 a, 23b of the sequence of liquid volumes from the first fluid channel 13, the spacers 20 are prevented from reaching the deposition areas 4a - 4c and a free sequence of separate liquid volumes, that is the sequence of separate liquid volumes with the spacers 20 being removed therefrom, is delivered toward the first aperture 15. Only the confinement volume 22 and, hence, the laminar flow C of the free sequence of separate liquid volumes come into contact with the deposition area 4a - 4c during operation.

The free sequence of separate liquid volumes discharges into the immersion liquid 10 through the first aperture 15 with a first flow rate Qi. At the same time, part of the immersion liquid 10 and the free sequence of separate liquid volumes that is discharged into the immersion liquid 10 are aspirated through the second aperture 16 into the second fluid channel 14 with a second flow rate Q2. For example, the first and second flow rates Qi, Q2 can be generated using corresponding pumps (not shown).

If the second flow rate Q2 is higher than the first flow rate Qi, and a ratio of the second flow rate Q2 to the first flow rate Qi is, for example, 1.2 - 10 (but preferably 1.5 - 6 and more preferably 2 - 4), a laminar flow C can be obtained from the first aperture 15 to the second aperture 16. Achieving such a laminar flow allows for hydrodynamic flow confinement. I.e., the laminar flow C is hydrodynamically confined by the immersion liquid 10 within a confinement volume 22 that extends from below the first aperture 15 to below the second aperture 16. The size of the confinement volume 22 and the shape of the laminar flow C are defined by, but not limited to, the first flow rate Qi, the second flow rate Q2 and the ratio of the second flow rate Q2 to the first flow rate Qi, the distance between the first and second apertures and/or the distance between the end face 12 and the respective target area 4a - 4c. For example, the first flow rate Qi may be chosen to be 1.0 fL/s - 1.0 mL/s, preferably 1.0 pL/s - 100 nL/s and more preferably 1.0 - 50 nL/s, and the second flow rate Q2 may be chosen to be 0.2 fL/s - 4.0 mL/s, preferably 2.0 pL/s - 400 nL/s and more preferably 2.0 - 200 nL/s.

In order to deposit the first liquid volume 23a onto the deposition area 4b, the microfluidic probe head 2 is positioned such that the confinement volume 22 is in contact with the deposition area 4b. A part of the liquid volume 23a and/or substances that are carried in the liquid volume 23a may adhere to the deposition area 4b and/or react with is substance that is located on top of the deposition area 4b. A remaining part of the liquid volume 23a moves along with the laminar flow C and is aspirated through the second aperture 16 into the second fluid channel 14. After the deposition of the first liquid volume 23 a, the microfluidic probe head 2 can be positioned above the next deposition area 4c in order to deposit the second liquid volume 23b onto it. The steps of positioning the microfluidic probe head 2 above the respective deposition area and depositing a liquid volume onto it can be repeated as many times as required.

FIG. 3 shows a schematic cross-sectional view of the first embodiment of the microfluidic probe head 2 and the fluid connections from FIG. 1.

The liquid supplies 5a - 5c are located outside of the body 11 of the microfluidic probe head 2. A valve device 24 fluidly connects the liquid supplies 5a - 5c and an inlet 25. The liquid supplies 5a - 5c contain different liquids. The liquid supplies 5a - 5c may contain a single liquid, an emulsion, a suspension and/or other mixtures of same phase or different phases, e.g. solid-liquid, liquid-gas and/or liquid-liquid mixtures. In particular, at least one of the liquid supplies 5a - 5c may contain a liquid that comprises a biochemical substance. In particular, at least one of the liquid supplies 5a - 5c may contain a liquid that is of use in (bio)chemical analysis and/or can be judged as such by those familiar with the field, e.g. any organic and/or inorganic fluids and/or substances that are related to lifeforms. Accordingly, the liquid supplies 5a - 5c may supply the microfluidic probe head 2 with one or more liquids containing biological substances, e.g. cells, proteins, DNA, drugs, antibodies, chemical stimulants and/or chemical responses. The liquids supplied by the liquid supplies 5a - 5c may differ, for example, in terms of chemical composition or a concentration of one or more substances contained therein. The liquid supplies 5a - 5c feed the liquids to the valve device 24.

The valve device 24 is fluidly connected to the first fluid channel 13 and is capable of feeding the liquids received from the liquid supplies 5a - 5c into the first fluid channel 13. In particular, the valve device 24 is configured for selectively feeding a specific amount of one of the liquids from the liquid supplies 5a - 5c into the first fluid channel 13. An inlet control unit 26 is located inside the body 1 1 of the microfluidic probe head 2 and configured for selectively, fluidly connecting the inlet 25 to one of the liquid supplies 5a - 5c by controlling the valve device 24. For this purpose, the valve device 24 is operable for consecutively and/or alternately feeding liquid volumes from the liquid supplies 5 a - 5c into the first fluid channel 13 via the inlet 25 thereby forming a free sequence of separate liquid volumes. The volume of each separate liquid volume and the order of the separate liquid volumes can be specified using the inlet control unit 26. For example, a fluorescence readout (a corresponding sensor is not shown) from the deposition areas 4a - 4g may be interpreted to control the time of exposure to a certain chemical. Once the desired time of exposure is reached, the liquid supplies 5a - 5c are switched using the valve device 24.

Alternatively, it is possible that only one liquid supply 5a is fluidly connected to the microfluidic probe head 2. In this case, liquid from the liquid supply 5a flows into the first fluid channel 13 instead of a plurality of different liquids. The spacer supply 6, located outside of the body 11 of the microfluidic probe head 2, is fluidly connected to a spacer insertion unit 27 via an inlet 27a and supplies it with oil that is immiscible with any of the liquids from the liquid supplies 5a - 5c and the immersion liquid 10 and is thereby suitable for providing the spacers 20. Instead of oil, other non-polar spacer fluids, such as fats, lipids, hexane and/or toluene that are immiscible with the liquids from the liquid supplies 5a - 5c and the immersion liquid may be employed. In this way, the separation of the liquid volumes from one another is facilitated due to an interfacial tension between adjacent spacers 20 and liquid volumes. The free sequence of separate liquid volumes flows along the first fluid channel 13 toward a spacer junction 28, where the spacer insertion unit 27 is fluidly connected to the first fluid channel 13. The spacer junction 28 is located between the inlet 25 and the first bypass junction 18 in the first fluid channel 13. The spacer insertion unit 27 is configured for inserting the spacers 20 into the first fluid channel 13, thereby forming a sequence of separate liquid volumes separated by the spacers 20. In particular, the insertion of the spacers 20 by the spacer insertion unit 27 is timed such that the liquid volumes of the free sequence of separate liquid volumes are separated from one another by the spacers 20. In case of one single liquid delivered to the spacer junction 28, the spacers 20 divide the liquid into separate liquid volumes 23a, 23b. A control unit 29 located inside the body 11 of the microfluidic probe head 2 controls the insertion of the spacers 20 into the first fluid channel 13 by the spacer insertion unit 27.

After deposition of a liquid volume the remaining part of the liquid volume, the retrieved spacers 20 and a part of the immersion liquid 10 are delivered to the disposal unit 7 via the second fluid channel 14. An outlet 30 fluidly connects the second fluid channel 14 located inside the body 11 of the microfluidic probe head 2 to the disposal unit 7 outside of it. The disposal unit 7 can be configured for recycling, re-using, storing and/or properly disposing the retrieved liquids. Alternatively or in addition, it is possible that the second fluid channel 14 is fluidly connected via the outlet 30 to an analyzing device that analyzes the liquid and/or spacers provided at the outlet 30.

A first detector 31 and a second detector 32 are installed in vicinity of the first fluid channel 13 and the second fluid channel 14, respectively, inside the body 11 of the microfluidic probe head 2. Both the first and second detectors 31, 32 are configured for detecting and identifying the spacer 20. Upon detection of the spacer 20, the first and second detectors 31, 32 generate a first detection signal and a second detection signal, respectively, and transmit it to the control unit 29. Based on the first and second detection signals the control unit 29 may synchronize the insertion rate of the spacers 20 into the first fluid channel 13 and the aspiration rate at which they are aspirated through the second fluid channel 14. To this end, the control unit 29 may control the insertion unit 29 and/or the aforementioned pumps accordingly.

In particular, the first and second detectors 31, 32 can be configured for detecting the spacers 20 by optical, electrical and/or magnetic means. Properties of the spacers 20 such as hydrophilicity and surface tension can be detected and/or measured by the first and second detectors 31, 32.

FIG. 4A - 4L illustrate subsequent operation steps of the microfluidic probe head 2 of FIG. 2. The immersion liquid 10 and the body 1 1 of the microfluidic probe head 2 are not shown.

In the following, achieving laminar flows allows for hydrodynamic flow confinement.

In FIG. 4A, a sequence of separate liquid volumes 23a - 23c separated by spacers 20a, 20b is delivered via the first fluid channel 13 to the first bypass junction 18. Due to the specific ratio of the second flow rate Q2 to the first flow rate Qi as described above, the laminar flow C from the first aperture 15 to the second aperture 16 is formed and confined by the immersion liquid 10 within the confinement volume 22 that extends from below the first aperture 15 to below the second aperture 16.

In FIG. 4B, a first liquid volume 23a flows past the blocking elements 21 and discharges through the first aperture 15 into the confinement volume 22, where the first liquid volume 23a is driven toward the second aperture 16 by the laminar flow C. In FIG. 4C, a first spacer 20a that separates the first liquid volume 23a and the second liquid volume 23b from each other flows into the fluid bypass 17 rather than passing through narrow subchannels formed by the blocking elements 21.

After the first spacer 20a is removed from the first fluid channel 13, the second liquid volume 23b moves toward the preceding first liquid volume 23a and comes into contact with it, as shown in FIG. 4C and 4D. At the same time, an overpressure is built inside the fluid bypass due to the first spacer 20a being added to the volumes of spacer fluid in the fluid bypass 17. The overpressure inside the fluid bypass 17 is reduced by releasing a spacer 20p from the fluid bypass 17 into the second fluid channel 14 at the bypass junction 19, as illustrated in FIG. 4D to 4F. The first liquid volume 23a, discharged into the confinement volume 22, moves with the laminar flow C. Since the confinement volume 22 is in a surface contact with the deposition area 4b, the first liquid volume 23 a comes into contact with the deposition area 4b, and a part of the first liquid volume 23a and/or substances that are carried by the first liquid volume 23a adheres to and/or reacts with the deposition area 4a. A remaining part of the first liquid volume 23 a reaches the second aperture 16 and is aspirated into the second fluid channel 14, as shown in FIG. 4F.

Following the first liquid volume 23a, the second liquid volume 23b is discharged through the first aperture 15 into the confinement volume 22 and flows toward the second aperture 16, as shown in FIG. 4G - 4K. In the meantime, the microfluidic probe head 2 is positioned above the next deposition area 4c, e.g. by means of the robotic arm 3, such that the confinement volume 22 is in a surface contact with the next deposition area 4c. During flowing along the laminar flow C within the confinement volume 22, a part of the second liquid volume 23b and/or substances that are carried by the second liquid volume 23b adhere to and/or react with the next deposition area 4c. A remaining part of the second liquid volume 23b reaches the second aperture 16 and is aspirated into the second fluid channel 14, as shown in FIG. 4L.

In FIG. 4G and 4H, a second spacer 20b that separates the second liquid volume 23b from a third liquid volume 23c reaches the first bypass junction 18 and flows into the fluid bypass 17 rather than passing through the narrow channels formed by the blocking elements 21. The third liquid volume 23c moves toward the second liquid volume 23b and comes into contact with it. The procedure described so far for both the first and second liquid volumes 23a, 23b applies to the third liquid volume 23c in the same manner.

The first and second flow rates Qi, Q2 can be synchronized (by way of the control unit 29, for example) such that the bypassing spacer 23p is inserted from the fluid bypass 17 into the second fluid channel 14 just when the retrieved first liquid volume 23a arrives in the second bypass junction 19, as illustrated in FIG. 41 - 4K. The retrieved first liquid volume 23a is thereby separated from the preceding liquid volumes moving along the second fluid channel 14 toward the outlet 30.

Accordingly, the subsequently retrieved/aspirated first and second liquid volumes 23a, 23b can be separated by properly phasing the insertion of the spacers 20 into the second fluid channel 14.

FIG. 5 shows a schematic cross-sectional view of a second embodiment of the micro fluidic probe head 2 and the fluid connections from FIG. 1.

The second embodiment of the microfluidic probe head 2 comprises all elements of the first embodiment of FIG. 3. In addition, a third fluid channel 33 is provided inside the body 11, and a third aperture 34 that is fluidly connected to the third fluid channel 33 is formed in the end face 12. Further, the third fluid channel 33 is fluidly connected to an additional disposal unit 35 that is capable of containing fluids via an outlet 35a.

A third flow rate (¾ is applied to the third fluid channel 33 such that liquids are aspirated through the third aperture 34 into the third fluid channel 33 using a corresponding pump (not shown), for example. The aspirated liquids are delivered via the third fluid channel 33 to the additional disposal unit 35. The third flow rate (¾ is preferably greater than the first flow rate Qi in order to generate and sustain a laminar flow C from the first aperture 15 to the third aperture 34. For example, the first flow rate Qi may be chosen to be 1.0 fL/s - 1.0 mL/s, preferably 1.0 pL/s - 100 nL/s and more preferably 1.0 - 50 nL/s. A ratio of the third flow rate (¾ to the first flow rate Qi may be chosen to be 1.2 - 10, preferably 1.5 - 6 and more preferably 2 - 4. The third flow rate (¾ may be 1.2 fL/s - 10 mL/s, preferably 2.0 pL/s - 400 nL/s and more preferably 2.0 - 200 nL/s.

Additionally, the device is preferably configured such that a distance Ti (see FIG. 6) between the first aperture 15 and the second aperture 16 is greater than a distance T2 between the first aperture 15 and the third aperture 34, in order to favor and sustain a laminar flow C between the first and third apertures 15, 34 over of a flow between the first and second aperture 15, 16. In particular, the distance T2 may be less than 2.0 mm, preferably less than 1.5 mm and more preferably less than 1.0 mm. Again, achieving such a laminar flow allows for hydrodynamic flow confinement. With the confinement volume 22 located between the first and the third apertures 15, 34, the second fluid channel 14 can mainly be used for retrieving the spacers 20. The remaining part of the liquid volumes 23a - 23c that does not adhere to the respective deposition areas 4b - 4d can be retrieved via the third fluid channel 33. Accordingly, retrieving the spacers 20 and the remaining part of the liquid volumes 23a - 23c is carried out separately at different locations.

FIG. 6 illustrates the fluid flows and the hydrodynamic flow confinement using the second embodiment of the micro fluidic probe head 2. The immersion liquid 10 and the body 1 1 of the microfluidic probe head 2 are not shown.

A sequence of separate liquid volumes separated by the spacers 20 flows along the first fluid channel 13 toward the first aperture 15 with the first flow rate Qi. At the first bypass junction 18, the spacers 20 are redirected from the first fluid channel 13 via the fluid bypass 17 into the second fluid channel 14. At the second aperture 16, the immersion liquid 10 is aspirated into the second fluid channel 14. The aspirated immersion liquid 10 and the redirected spacers 20 are delivered to the outlet 30 via the second fluid channel 14. A laminar flow C from the first aperture 15 to the third aperture 34 is formed and confined by the immersion liquid 10 within a confinement volume 22' that extends from below the first aperture 15 to below the third aperture 34. The microfluidic probe head 2 is positioned such that the confinement volume 36 is in a surface contact with the deposition area 4. While a liquid volume 23a moves with the laminar flow C inside the confinement volume 22', a part of the liquid volume 23a and/or substances that are carried by the liquid volumes 23 adhere to the deposition area 4 and/or react with substances located on top of the deposition area 4. The operation steps of positioning the microfluidic probe head 2 and depositing a part of the liquid volume 23 a and/or substances carried by the liquid volume 23 can be repeated arbitrarily in order to deposit the sequence of separate liquid volumes 23a - 23c onto the respective deposition areas 4. FIG. 7 - 9 show a portion of a microfluidic probe head 2 in enlarged views VII, VIII, IX from FIG. 3 or FIG. 5 in accordance with three different embodiments. In particular, parts of the first and second fluid channels 9, 11 , the blocking elements 23 and the fluid bypass 18 are shown.

In all three embodiments, the blocking elements 21a - 21c are shaped as three bars each having a width W and different lengths Li - L3. For example, W is 5 - 80 μιη, Li is 120 - 160 μιη, L2 is 80 - 120 μιη and L3 is 40 - 80 μιη. Subchannels 36 are formed between two neighboring blocking elements 21 and/or an inner wall of the first fluid channel 13, with a width of each subchannel 36 being the distance D between the respective blocking elements 21a - 21c and/or an inner wall of the first fluid channel 13. For example, D is 5 - 30 μιη.

If a viscosity of the spacers is higher than the viscosity of the liquid volumes 23a - 23c, the spacers 20 are redirected off a front face of the blocking elements 21a - 21c rather than enter the subchannels 36 due to an interfacial tension between the spacers and the liquid volumes. Consequently, the blocking element 21a - 21c can redirect the spacers 20 from the first fluid channel 13 into the fluid bypass 17 while the liquid volumes 23a - 23c flow through the subchannels 36. In all three embodiments, the first fluid channel 13 has a diameter Ai between the spacer junction 28 and the first bypass junction 18. The first fluid channel 13 opens up to a diameter A2 at the position of the blocking elements 21. Downstream of the blocking element 21 until the first aperture 15, the first fluid channel 13 tapers to a diameter A3 at the first aperture 15. For example, Ai is 50 - 200 μιη, A2 is 70 - 400 μιη and A3 is 20 - 100 μιη.

The second fluid channel 14 has a diameter Bi at the second aperture 16 and a diameter B2 in the remaining part. Bi and B2 can differ or be equal. For example, both Bi and B2 are 25 μιη - 150 μιη, respectively. In FIG. 7, the fluid bypass 17 has a width Pi at the first bypass junction 18 and tapers down continuously toward the second bypass junction 19 to a width P 2 , thereby increasing a pressure at the second bypass junction 19. For example, Pi is 50 - 500 μιη and P2 is 10 - 100 μιη. In FIG. 8, the width of the fluid bypass 17 increases from P i at the first bypass junction 18 to P3 at a plane 37, then decreases to P2 at the second bypass junction 19. In this way, a greater holding capacity of the fluid bypass 17 for containing spacers is provided. For example, P3 is 100 - 1000 μιη.

In FIG. 9, the width Pi of the fluid bypass 17 is constant up to a plane 38 and decreases to P2 at the second bypass junction 19. In addition or alternatively, the second fluid channel 1 1 is constricted to a width B3 at the second bypass junction 19 in order to increase the pressure. For example, B3 is 20 - 80 μιη.

In all three embodiments of the fluid bypass 17, the pressure at the second bypass junction 19 is increased by geometry. Accordingly, the spacers 20 can be inserted into the second fluid channel 14 instead of leaking into it. The suggested method and micro fluidic probe involving the suggested micro fluidic probe head provide possibilities of consecutive deposition of a plurality of liquid volumes separated by spacers and enables a user to effectively remove the spacers in order to prevent them from reaching the deposition area. In particular, a physical contact of the microfluidic probe and/or the microfluidic probe head with the deposition are can be avoided.

The suggested method and microfluidic probe involving the suggested microfluidic probe head could be applied to locally performing immunohistochemistry on a surface. Multiple liquids could be delivered sequentially onto immobilized cells, formalin fixed tissue sections and/or frozen tissues. In particular, sequential exposure of biological surfaces to a primary antibody, a biotin-labeled secondary antibody and/or streptavidin/HRP with intermittent buffer washing steps could be performed in order to generate a colorimetric signal that indicates the presence (or absence) of a disease marker.

The suggested method and microfluidic probe involving the suggested microfluidic probe head could be applied for surface-based immunoassays that require high efficiency in terms of space and reagent usage, in particular for batch processing in mass manufacturing. In particular, patterning different types of proteins and/or antibodies on a surface, e.g. for the research of allergic reactions, detection of viral and/or bacterial infections, could be performed by repeating operation steps of loading the microfluidic probe with one antibody solution and purging subsequently. The suggested technology could reduce a reagent usage and time requirements for these assays.

The suggested method and microfluidic probe involving the suggested microfluidic probe head could be applied for secretome analysis by delivering a sequence of chemical stimulation pulses to cells immobilized on a surface and exposing the surface to a sequence of liquid sections. The microfluidic probe could further be used for retrieving a response of the cells to the delivered stimulation. More generally, while the present invention has been described with reference to certain embodiments, it will be understood by those skilled in the art that various changes may be made and equivalents may be substituted without departing from the scope of the present invention. In addition, many modifications may be made to adapt a particular situation to the teachings of the present invention without departing from its scope. Therefore, it is intended that the present invention not be limited to the particular embodiments disclosed, but that the present invention will include all embodiments falling within the scope of the appended claims.

REFERENCE SIGNS

1 microfludic probe

2 microfluidic probe head

3 robotic arm

4a - 4h deposition area

5a, 5b, 5c liquid supplies

6 spacer supply

7 disposal unit

8 bottom surface

9 Petri dish

10 immersion liquid

1 1 body

12 end face

13 first fluid channel

14 second fluid channel

15 first aperture

16 second aperture

17 fluid bypass

18 first bypass junction

19 second bypass junction

20, 20a - 20c spacers

21, 21a - 21c blocking elements

22, 22' confinement volumes

23a - 23c liquid volumes

24 valve device

25 inlet

26 inlet control unit

27 spacer insertion unit

27a inlet

28 spacer junction

29 control unit

30 outlet

31 first detector 32 second detector

33 third fluid channel

34 third aperture

35 additional disposal unit 35a outlet

36 subchannel

37 plane

38 plane

Ai, A 2 , A 3 diameter

Bi, B2, B3 diameter

C, C laminar flow

D distance

Li, L 2 , L3 length

Pi, P 2 , P3 width

Ti, T 2 distance

w width