Title:
OPTIMIZED KRAKEN2 ALGORITHM AND APPLICATION THEREOF IN SECOND-GENERATION SEQUENCING
Document Type and Number:
WIPO Patent Application WO/2023/283967
Kind Code:
A1
Abstract:
A biological information analysis method based on a kraken2 single-sequence kmer score and overall taxonomy structure statistics. By means of the method, false positives in biological information analysis can be reduced, and the species detection accuracy can be improved. The method is applicable to second-generation metagenome sequencing analysis.
Inventors:
ZHANG YAN (CN)
LI ZHENZHONG (CN)
REN YONG (CN)
LI SHIMENG (CN)
GUO HAO (CN)
LIANG XIANGZHI (CN)
CHEN LI (CN)
DAI YAN (CN)
LI SHAN (CN)
GU JU (CN)
LI ZHENZHONG (CN)
REN YONG (CN)
LI SHIMENG (CN)
GUO HAO (CN)
LIANG XIANGZHI (CN)
CHEN LI (CN)
DAI YAN (CN)
LI SHAN (CN)
GU JU (CN)
Application Number:
PCT/CN2021/106970
Publication Date:
January 19, 2023
Filing Date:
July 17, 2021
Export Citation:
Assignee:
JIANGSU SIMCERE DIAGNOSTICS CO LTD (CN)
JIANGSU SIMCERE MEDICAL DEVICE CO LTD (CN)
NANJING SIMCERE DIAGNOSTIC TECH CO LTD (CN)
JIANGSU SIMCERE MEDICAL DEVICE CO LTD (CN)
NANJING SIMCERE DIAGNOSTIC TECH CO LTD (CN)
International Classes:
G16B30/10
Foreign References:
| CN113539369A | 2021-10-22 | |||
| CN113096737A | 2021-07-09 | |||
| CN111681704A | 2020-09-18 | |||
| CN112071366A | 2020-12-11 | |||
| US20210141833A1 | 2021-05-13 |
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