Title:
VERIFICATION OF FISH ORIGIN BASED ON NUCLEIC ACID PATTERN RECOGNITION
Document Type and Number:
WIPO Patent Application WO2003060160
Kind Code:
A3
Abstract:
This invention is directed to isolated nucleic acid molecules that encompass a single nucleotide polymorphism (SNP) associated with fish. The present invention further is directed to isolated nucleic acid molecules that encompass a microsatellite sequence associated with fish. The invention further is directed to a method of determining the parentage origin of a fish sample (or a sample from any biological species with similar organization of reproduction as fish) by providing a parentage genotype database that contains a collection of candidate parent genotypes that each represent a distinct parentage origin and comparing a sample genotype to the parentage genotype database, such that a match between a sample genotype and one of the candidate parent genotype identifies the parentage origin of the sample.
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Inventors:
LIE OEYSTEIN (NO)
SLETTAN AUDUN (NO)
HOEYUM MORTEN (NO)
LINGAAS FRODE (NO)
SLETTAN AUDUN (NO)
HOEYUM MORTEN (NO)
LINGAAS FRODE (NO)
Application Number:
PCT/IB2003/000112
Publication Date:
December 24, 2003
Filing Date:
January 17, 2003
Export Citation:
Assignee:
GENOMAR ASA (NO)
LIE OEYSTEIN (NO)
SLETTAN AUDUN (NO)
HOEYUM MORTEN (NO)
LINGAAS FRODE (NO)
LIE OEYSTEIN (NO)
SLETTAN AUDUN (NO)
HOEYUM MORTEN (NO)
LINGAAS FRODE (NO)
International Classes:
C12N15/09; C12N15/11; C12Q1/68; G16B30/00; (IPC1-7): C12Q1/68; C12N15/11
Domestic Patent References:
| WO2001077384A2 | 2001-10-18 |
Other References:
EINAR E NIELSEN ET AL: "Looking for a needle in a haystack: Discovery of indigenous atlantic salmon (Salmo salar L.) in stocked populations.", CONSERVATION GENETICS, vol. 2, 2001, Kluwer Academic Publishers NL, pages 219 - 232, XP002902900
ASHIE T NORRIS ET AL: "Parentage and relatedness determination in farmed atlantic salmon (Salmo salar) using microsatellite markers.", AQUACULTURE, vol. 182, 2000, Elsevier Science B.V., pages 73 - 83, XP002902902, ISSN: 0044-8486
P T O'REILLY ET AL: "Analysis of parentage determination in atlantic salmon (Salmo salar) using microsatellites.", ANIMAL GENETICS, vol. 29, 1998, pages 363 - 370, XP002902903
DATABASE MEDLINE [online] US NATIONAL LIBRARY OF MEDICINE (NLM), BETHESDA, MD, US; 20 September 2001 (2001-09-20), NIELSEN E E ET AL: "Fisheries. Population of origin of Atlantic cod.", XP002902904, Database accession no. NLM11565021
GEOFF DUYK ET AL: "Fish x 3", NATURE GENETICS, vol. 27, no. 1, January 2001 (2001-01-01), pages 8 - 9, XP002902905, ISSN: 1061-4036
SPRUELL P ET AL: "Inheritance of nuclear DNA markers in gynogenetic haploid pink salmon.", JOURNAL OF HEREDITY, vol. 90, no. 2, March 1999 (1999-03-01), pages 289 - 296, XP002902906, ISSN: 0022-1503
LAWRENCE A RIGGS ET AL: "Identification and assay of SNP variation in salmon using available DNA sequence data and an automated liquid bead array system: An integration of tools for mixed-stock fishery analysis and monitoring.", 20TH LOWELL WAKEFIELD FISHERIES SYMPOSIUM ON GENETICS OF SUBPOLAR FISH AND INVERTEBRATES: PRELIMINARY PROGRAM, 29 May 2002 (2002-05-29) - 31 May 2002 (2002-05-31), Westmark Baranof Hotel,Juneau,Alaska,USA, XP002902918, Retrieved from the Internet [retrieved on 20030610]
ASHIE T NORRIS ET AL: "Parentage and relatedness determination in farmed atlantic salmon (Salmo salar) using microsatellite markers.", AQUACULTURE, vol. 182, 2000, Elsevier Science B.V., pages 73 - 83, XP002902902, ISSN: 0044-8486
P T O'REILLY ET AL: "Analysis of parentage determination in atlantic salmon (Salmo salar) using microsatellites.", ANIMAL GENETICS, vol. 29, 1998, pages 363 - 370, XP002902903
DATABASE MEDLINE [online] US NATIONAL LIBRARY OF MEDICINE (NLM), BETHESDA, MD, US; 20 September 2001 (2001-09-20), NIELSEN E E ET AL: "Fisheries. Population of origin of Atlantic cod.", XP002902904, Database accession no. NLM11565021
GEOFF DUYK ET AL: "Fish x 3", NATURE GENETICS, vol. 27, no. 1, January 2001 (2001-01-01), pages 8 - 9, XP002902905, ISSN: 1061-4036
SPRUELL P ET AL: "Inheritance of nuclear DNA markers in gynogenetic haploid pink salmon.", JOURNAL OF HEREDITY, vol. 90, no. 2, March 1999 (1999-03-01), pages 289 - 296, XP002902906, ISSN: 0022-1503
LAWRENCE A RIGGS ET AL: "Identification and assay of SNP variation in salmon using available DNA sequence data and an automated liquid bead array system: An integration of tools for mixed-stock fishery analysis and monitoring.", 20TH LOWELL WAKEFIELD FISHERIES SYMPOSIUM ON GENETICS OF SUBPOLAR FISH AND INVERTEBRATES: PRELIMINARY PROGRAM, 29 May 2002 (2002-05-29) - 31 May 2002 (2002-05-31), Westmark Baranof Hotel,Juneau,Alaska,USA, XP002902918, Retrieved from the Internet
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