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Title:
MICRO TITRE PLATE
Document Type and Number:
WIPO Patent Application WO/2010/044727
Kind Code:
A1
Abstract:
A micro titre plate comprising a number of wells filled with separation matrix. According to the invention the volume of the separation matrix is varied between at least some of the wells.

Inventors:
LACKI KAROL (SE)
Application Number:
PCT/SE2009/051113
Publication Date:
April 22, 2010
Filing Date:
October 07, 2009
Export Citation:
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Assignee:
GE HEALTHCARE BIO SCIENCES AB (SE)
LACKI KAROL (SE)
International Classes:
B01D53/04; B01L3/00; B01J19/00; B01J20/00
Other References:
BERGANDER T. ET AL: "High-Throughput Process Development: Determination of Dynamic Binding Capacity Using Microtiter Filter Plates Filled with Chromatography Resin", BIOTECHNOL. PROG., vol. 24, 2008, pages 632 - 639, XP003026375
NENG-HUA GUO ET AL: "Heparin-binding Peptides from the Type I Repeats of Thrombospondin", THE JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 267, no. 27, 25 September 1992 (1992-09-25), pages 19349 - 19355, XP000650493
LJUNGLOF A. ET AL: "Measurement of ligand distribution in individual adsorbent particles using confocal scanning laser microscopy and confocal micro-Raman spectroscopy", JOURNAL OF CHROMATOGRAPHY A, vol. 893, 2000, pages 235 - 244, XP004212032
Attorney, Agent or Firm:
GE HEALTHCARE BIO-SCIENCES AB et al. (Björkgatan 30, Uppsala, SE)
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Claims:
Claims

1. A micro titre plate comprising a number of wells filled with separation matrix, characterised in that the volume of the separation matrix is varied between at least some of the wells.

2. A micro titre plate according to claim 1, characterised in that the volume of the separation matrix is well defined in each well and distributed according to a specific pattern.

3. A micro titre plate according to claim 1, characterised in that the volume of the separation matrix is well defined in each well and distributed according to a specific pattern which when the plate is used for adsorption isotherm measurements with constant volume and concentration of added sample to the wells that will be used will result in an isotherm where at least 10% of the points being below the 50% maximum capacity levels.

4. A micro titre plate according to claim 1, characterised in that the volume of the separation matrix is well defined in each well and distributed according to a specific pattern which when the plate is used for adsorption isotherm measurements with constant volume and concentration of added sample to the wells that will be used will result in an isotherm where concentrations in the liquid phase after the end of the experiment will be distributed according to the following relationship: concentration in liquid phase in one well divided with the concentration in liquid phase in a neighbouring well with different amount of separation matrix will be between 1 and 3.

5. A micro titre plate according to claim 4, wherein the concentration in liquid phase in one well divided with the concentration in liquid phase in a neighbouring well with different amount of separation matrix will be 2.

6. A micro titre plate according to any of the preceding claims, characterised in that the same separation matrix volume is provided in all the wells of the same column.

7. A micro titre plate according to any of the claims 1-5, characterised in that the same separation matrix volume is provided in all the wells of the same row.

8. A micro titre plate according to any one of the preceding claims, where each well in the plate has a permeable filter in the bottom.

9. A method of filling a micro titre plate with separation matrix, characterised by - determining a suitable distribution of volumes of separation matrix between the wells based on the specific screening process that will be performed;

- filling the wells of the micro titre plate with separation matrix according to the determined suitable distribution.

10. A method for determining an adsorption isotherm comprising the steps of:

- using a micro titre plate according to any one of the claims 1-8;

- adding the same volume and concentration of a sample to the number of wells needed for the analysis;

- waiting for a predefined period of time, preferably until equilibrium is reached; - measuring concentration of liquid phase and/or solid phase in at least two wells with different volumes of separation matrix

11. Using a micro titre plate according to any one of the claims 1-8 for determining adsorption isotherms.

Description:
MICRO TITRE PLATE

Field of the Invention

The present invention relates to micro titre plates of the type mentioned in the preamble of the independent claim 1 and to methods for high throughput screening of adsorption systems including methods for determination of adsorption isotherms.

Background

Multiwell plates, also called micro titre plates, have been used for many years in laboratories for the simultaneous analysis of a number of samples. Typical formats include 4, 24, 48, 96 and 384 wells per plate. Initially, these plates had solid bases and liquid samples were pipetted into and out of the wells.

Subsequently, plates with wells provided with a lower well through hole (known as a "drip" if it is provided with downward protruding lips) pierced through the bottom surface. These micro titre plates allowed the samples to flow through the wells which permitted larger sample volumes to be processed (since the sample size was no longer limited to the capacity of the well).

Later developments of micro titre plates were provided with filter or membrane wells in which each well was provided with a microporous filter or membrane which extended over the cross- section of the well such that all of the sample passing through the well had to pass through the filter or membrane. These micro titre plates are also called micro titre filter plates.

A further development of a micro titre plate comprises wells with a lower well through hole or drip and a filter or membrane and which wells are each at least partly filled with a media such as a chromatographic gel or slurry or chromatographic particles.

Different screening processes that could be performed on such micro titre plates are for example screening of/for: i) conditions for optimal binding capacity, ii) most efficient wash buffers for washing off impurities from chromatography resin; iii) most efficient eluting solution; iv) selectivity obtained using different ligands, v) best resin either from capacity or purity perspective. Considering the multi well format of microtiter plates, if processes under different conditions need to be studied there are different possibilities to change conditions on a single plate. For example the concentration of the sample added can be changed, the composition of the buffer in which the sample is dissolved can be changed, the effect of overall time of contact between the sample and a chromatography resin can be studied, or any combinations of the above.

High throughput studies of chromatographic separations using microtiter plates filled with chromatography resin proved highly efficient in reducing time and sample requirements necessary for development of large scale purification processes. While the studies reported have focused on specific aspects of chromatographic steps, a very few studies have been reported focusing on understanding physics of the separation processes studied. From understanding the separation process perspective the knowledge of adsorption isotherm is of paramount importance. Adsorption isotherms are fundamental property of any separation systems, and an isotherm should always be determined in order to full understand governing principles behind an adsorption process.

Summary of the Invention

According to the present invention, an improved micro titre plate filled with a separation matrix according to the characterising part of claim 1 is provided.

Hereby the user can add the same volume of sample having the same concentration and still obtain data pertaining to different saturation of separation matrix with the sample because of the different media volumes in different wells.

Suitably the different media volumes are chosen based on a specific algorithm assuring the highest possible quality of the data obtained with respect to describing of adsorption equilibria for the system studied.

Further suitable embodiments are described in the dependent claims.

Furthermore a method for determining an adsorption isotherm is provided according to claim 11. Furthermore the use of a micro titre plate according to the invention for determining adsorption isotherms is described.

Brief Description of the Figures

Figure 1 is a schematic view of a micro titre plate filled with separation matrix according to a first embodiment of the invention.

Figure 2 is a schematic view of a micro titre plate filled with separation matrix according to a second embodiment of the invention.

Figure 3 is a schematic view of a micro titre plate filled with separation matrix according to a third embodiment of the invention.

Figure 4 shows an example of separation matrix volume distributions for the plate layouts shown in Figure 1-3.

Figure 5 a is a diagram showing the principle for obtaining an adsorption isotherm using constant separation matrix volume.

Figure 5b is a diagram showing the principle for obtaining an adsorption isotherm using the present invention.

Figure 6 shows the different separation matrix volumes of Example 1.

Figure 7a shows the adsorption isotherm obtained using the six different separation matrix volumes of Example 1.

Figure 7b shows the adsorption isotherm obtained using the eigth different separation matrix volumes of Example 1.

Figure 7c shows the adsorption isotherm obtained using the twelve different separation matrix volumes of Example 1. Detailed Description of Embodiments Illustrating the Invention

A multiwell plate, also called a micro titre filter plate or micro titre plate, that is filled with a separation matrix is provided. The separation matrix could be a chromatography media and it can also be called for example a solid phase, resin, gel or adsorber. The number of wells in the plate is in a first embodiment of the invention 96. Other numbers are however also possible such as 24, 48, and 384. According to the invention at least some of the wells of the plate are filled with well defined different amounts of separation matrix. The distribution of separation matrix in the different wells can be different for different uses of the plate. Micro titre plates are used for the screening of different chromatographic attributes such as for example determination of binding capacities, effectiveness of wash buffer in removal of impurities, effect of different buffer conditions on selectivity ( a relative difference between capacities for different solutes adsorbing on the solid phase) or for studying the effect of solute concentration in the liquid phase on the amount of solute adsorbed on the solid phase, a so called adsorption isotherms studies. For a person skilled in the art of chromatography it is known that adsorption isotherm is a fundamental concept for describing adsorption processes, including all the processes listed above. According to the invention it has been shown that for the study of adsorption isotherm it is beneficial to have a distribution of different volumes of separation matrix in at least some of the different wells. A correctly chosen distribution of different volumes in a plate enables collection of adsorption data which quality will be sufficient to describe an adsorption isotherm in the most effective manner using the smallest number of data points necessary.

A first embodiment of the invention is shown in Figure 1. In this example a 96 wells plate is used and there are six different volumes of separation matrix in the wells. The two first columns have in this example the same volume of separation matrix in all wells. The two next columns have the same volume of separation matrix in each well but this volume is different from the first volume etc. according to Figure 1.

Figure 2 is another example of an advantageous distribution Here there are 12 different volumes of separation matrix. The volume of separation matrix is the same in all wells in the same column. But the volume differs between the columns according to Figure 2.

Figure 3 is a a further example of distribution. Here each row has the same volume of separation matrix in all it's wells and all rows have different volumes of separation matrix. Figure 4 is an example of separation matrix volume distributions for the plate layouts shown in

Figure 1-3. These numbers are only meant to be used as an example and should not be limiting the scope of the invention.

Adsorption isotherm describes thermodynamic of adsorption process studies, and therefore, is a fundamental property of any protein separation system. This knowledge about the type of isotherm responsible for a separation is a prerequisite to correctly describe the separation.

Among many methods for determination of adsorption isotherms a method based on batch adsorption is fairly popular. In this method a well defined volume of separation matrix and sample are brought in contact with each other and after equilibrium is reached between concentrations in the liquid and solid phases these concentrations are measured and a single point on the adsorption isotherm is obtained. In order to obtain more points either ratio of separation matrix to sample volume or sample concentration need to be changed. While changing sample volume is fairly easy there may be limitations related to a total volume of a system available for experiments. Changing separation matrix volume is also difficult and special methods need to be developed to have a full control over the resin volume used. Changing sample concentration seems easy but only if composition of bulk liquid is known. If the composition is complex, changing sample concentration without changing the composition is close to impossible for most of practical situations, especially if the concentration needs to be increased. Figure 5a shows a diagram of an adsorption isotherm achieved by using the same solid phase volume and changing the sample concentration. The x-axis is concentration in liquid phase and the y-axis is concentration in solid phase. From each starting point with different sample concentration a single point on the adsorption isotherm is achieved when equilibration is reached. The operating lines shown in Figure 5 a are a graphical representation of mass balance over a single well. The operating line originates at the point representing initial state of the system and ends at the point representing the equilibrium state given by the adsorption isotherm. The phase ratio, Vliq/Vsolid is the slope of the operating line.

According to the invention plates are provided with different separation matrix volumes in the wells as described above. In Figure 5b the method of achieving an adsorption isotherm from such a plate is shown. The same sample concentration and volume is used all the time but different points on the adsorption isotherm will still be achieved because of the different operating lines originating from the fact that the solid phase volume is different. From mathematical perspective it can be shown that adsorption isotherms are best described by physical models if points on the adsorption isotherm are distributed in a certain fashion. One example could be that each consecutive equilibrium point is obtained at 2 times higher concentration than the preceding point, and that at least 10% of all points should describe isotherm in the region where capacities are lower than 50 % of maximum capacity.

Another example of how to distribute the volumes of separation matrix in the micro titre plate can be to provide volumes that when the plate is used for adsorption isotherm measurements with constant volume and concentration of added sample to the wells that will be used will result in an isotherm where concentrations in the liquid phase after the end of the experiment will be distributed according to the following relationship: concentration in liquid phase in one well divided with the concentration in liquid phase in a neighbouring well with different amount of separation matrix will be between 1 and 3 and most preferable 2. When the larger volume is the numerator. See further example 1 below.

According to the invention a method for determining an adsorption isotherm is further provided. The method comprises the steps of:

- using a micro titre plate according to the invention as described above;

- adding the same volume and concentration of a sample to the number of wells needed for the analysis;

- waiting for a predefined period of time, preferably until equilibrium is reached;

- measuring concentration of liquid phase and/or solid phase in at least two wells with different volumes of separation matrix.

Furthermore, this invention covers the use of a micro titre plate according to the invention for determining adsorption isotherms.

Furthermore a method of filling a micro titre plate with separation matrix is proposed in this invention. The method comprises the steps of: - determining a suitable distribution of volumes of separation matrix between the wells based on the specific screening process that will be performed;

- filling the wells of the micro titre plate with separation matrix according to the determined suitable distribution. These plates according to the invention would also be advantageous to use in other screening processes. For example in determination of effect of contact time on binding capacities. Such studies will lead to elucidation of transport mechanism behind protein adsorption, which in turn would lead to ability to mechanistically describe the adsorption process studied.

Example 1

From a statistical point of view it is recommended that in order to obtain the most precise values of model parameters describing an adsorption isotherm, batch experiments should be performed applying an experimental design that would result in equilibrium concentrations characterized by a dilution like (geometric) pattern. This can be shown using the following as an example a case of a Langmuir isotherm, given here by Eq. (1), with maximum binding capacity, Qmax , and the dissociation constant, K , as model parameters. Following the work of Currie (1986) who performed extensive testing of the typical designs used to evaluate enzyme kinetic parameters for the Michaelis-Menten type of enzyme kinetics and showed that the modified dilution/geometric design resulted in the most precise values of the model parameters, it can be concluded that similar designs would be applicable for the Langmuir isotherm model because from the mathematical point of view, the equation describing Michaelis-Menten kinetics is not different from the Langmuir isotherm. q(C) = Q≡£- (1)

V ' K + C

According to Currie (1986), for a sequence ofn observations obtained from runs performed at locations described by the form given by Eq.(2), the values of parameters in Eq.(l) that minimise the generalised parameter variance are shown in Table 1.

C 1 = Gr'- 1 (2)

where: C 1 stands for the concentration of protein in the z-th run, and the a and r are the parameters. Table 1

6 0.601 K 3.45 8 0.508 K 2.52 12 0.434 K 1.84

In case of a typical adsorption isotherm experiments using a batch adsorption protocol the following mass balance always holds at each run location

q, (c,) = v (c o , -c,) (3)

where: β is a phase ratio defined as L / v ; V L and Vs represents volume of liquid and solid

/ v s phase, respectively; q/CJ is an equilibrium adsorption capacity for i-th run, C oa and C 1 are initial and equilibrium protein concentrations for i-th run.

Combining Eq.(l) and Eq. (2) and assuming that the sample volume is constant yields Eq. (4) which describes the preffered distribution of phase ratios for a constant sample concentration, Co case, as a function of number of run locations and the expected shape the adsorption isotherm.

V solid, i = V samp

In order to obtain a suitable distribution of V so iid, an a priori knowledge of values for the dissociation constant K and the maximum equilibrium capacity Q max is needed. Obviously, this is an evident paradox since these parameters are to be found using the above design. In order to circumvent this situation, educated guesses for these parameters need to be used. These guesses, can be based on data pertaining to similar adsorptive systems,

Examples of suitable resin distributions for the case when system volume is 200 uL and initial concentration is 4 g/L for a fairly typical protein adsorption characterize by Q max = 50 g/L and K = 0,01 g/L is given in Table El of Figure 6. The isotherm that would be obtained using resin distributions form Table El are shown in Figures 7a, b and c,

The above experimental design can be further simplified. In the simplified version the design is based on geometrical series with a factor of 2, and with the second run location being performed at an initial concentration yielding the equilibrium concentration to be equal to the value of dissociation constant K. This design is thus characterize by the following relations (Eq. (5)), which upon substitution into Eqn.(l) and (2)characterize , will yield the new distribution of the solid phase. C 1 = Ka' '2 (5)

Following a similar logic the following modification to the simplified design can be also proposed, especially if the value of K is not really known.

C 1 = ^T (6) where: C max is the highest available concentration of protein, and i is the run number.

References

Currie, D. R., Estimating Michaelis Menten parameters: Bias, variance, and experimental design. Biometrics, 38(4), 907-919, 1982