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Title:
SOLID STATE FERMENTATION AND FED BATCH FOR THE PRODUCTION OF AN IMMUNOSUPPRESSANT
Document Type and Number:
WIPO Patent Application WO/2004/022767
Kind Code:
A1
Abstract:
The present invention provides a novel method for producing compound of Formula (I) or any of its salt form, by solid state fermentation, optionally using fed-batch technique by culturing microorganisms capable of producing the compound of Formula (I).

Inventors:
GARG SAURABH (IN)
MELARKODE RAMAKRISHNAN (IN)
GURURAJA RAMAVANA (IN)
SURYANARAYAN SHRIKUMAR (IN)
Application Number:
PCT/IN2002/000185
Publication Date:
March 18, 2004
Filing Date:
September 09, 2002
Export Citation:
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Assignee:
BIOCON LTD (IN)
GARG SAURABH (IN)
MELARKODE RAMAKRISHNAN (IN)
GURURAJA RAMAVANA (IN)
SURYANARAYAN SHRIKUMAR (IN)
International Classes:
C07D498/18; C12P17/18; (IPC1-7): C12P17/18; A61K31/436; C07D498/18; C12M1/16; C12N1/20; C12N11/08; C12N11/12; C12R1/55
Foreign References:
AU200024190A1
GB1436447A1976-05-19
Other References:
FANG A.: "Growth of streptomyces hygroscopicus in rotating-wall bioreactor under simulated microgravity inhibits rapamycin production", APPL. MICROBIOL. BIOTECHNOL., vol. 54, 2000, pages 33 - 36
SEHGAL S.N. ET AL.: "Rapamycin (AY-22,989), a new antifungal antibiotic", THE JOURNAL OF ANTIBIOTICS, vol. 28, no. 10, 1975, pages 727 - 732
LEE M.S. ET AL.: "Effect of nitrogen source on biosynthesis of rapamycin by streptomyes hygroscopicus", JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, vol. 19, 1997, pages 83 - 86
KOJIMA I. ET AL.: "Carbon source nutrition of rapamycin biosynthesis in streptomyces hygroscopicus", JOURNAL OF INDUSTRIAL MICROBIOLOGY, vol. 14, 1995, pages 436 - 439
SCHUHMANN E. AND BERGTER F.: "Mikroskopische untersuchungen zur wachstumskinetik von streptomyces hygroscopicus", ZEITSCHRIFT FUR ALLG. MIKROBIOLOGIE, vol. 16, no. 3, 1976, pages 201 - 215
Attorney, Agent or Firm:
Anand, Pravin (B-41 Nizamuddin East, New Delhi 3, IN)
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Claims:
We claim :
1. A process of manufacture of a compound of formula I or it's salts from a microorganism capable of producing compound comprising Formula I preparing an inoculum of the said microorganism, inoculating the solid state substrate with the said inoculum, incubating the said inoculated solid substrate matrix and extracting the said incubated solid substrate matrix to obtain the said compound.
2. A process as claimed in claim 1, wherein the solid substrate fermentation is carried out using Streptomyces hygroscopius.
3. A process as claimed in claim 1, wherein the solid substrate for fermentation is selected from wheat bran, wheat rawa, oat meal, broken wheat, boiled rice, rice bran, rice rawa, beaten rice, maize bran, maize grits, oat bran, bagasse, tapioca residue, soy grits, soy flakes, rice flakes, ceramic beads, glass beads, sponge or a mixture of two or more of these.
4. A process as claimed in claim 1, wherein the solid substrate fermentation is a fedbatch fermentation.
5. A process as claimed in claim 4, wherein the feeding for fedbatch fermentation is done at the beginning of the fermentation or at intervals throughout the fermentation.
6. A process as claimed in claim 45, wherein the carbon source for feeding is selected from glucose, sucrose, starch (maize, wheat, tapioca, potato), modified starch, maltose, maltodextrin, soybean oil, acetate or a mixture of two or more of these.
7. A process as claimed in claim 45, wherein the nitrogen source for feeding is selected from ammonium sulphate, dried yeast, ammonium nitrate, sodium nitrate, bacteriological peptone, yeast extract, casein hydrolyzate, soy peptone, soy flour, cotton seed flour, corn steep liquor or a mixture of two or more of these.
8. A process as claimed in claim 1 wherein the inoculated solid substrate matrix is incubated for 47 days at 2530 °C.
Description:
SOLID STATE FERMENTATION AND FED BATCH FOR THE PRODUCTION OF AN IMMUNOSUPPRESSANT BACKGROUND OF INVENTION The present invention provides a novel method for producing compound of Formula I or its any salt form by solid state fermentation, of microorganisms of Streptomyces hygroscopicus capable of producing the compound of Formula I.

BACKGROUND OF THE INVENTION Rapamycin of formula I is a peptide isolated as an extract of the bacteria Streptomyces hygroscopicus and reported to have antifungal activity (British Patent 1436447). Subsequently rapamycin has been implicated as an immunosuppressant (Martel R. R. et al Can. J. Physiol.

Pharmacol. 55,48-51, 1977). The immunosuppressive effects of rapamycin have also been disclosed in FASEB 3, 3411 (1989). Rapamycin has been shown to be effective in inhibiting transplant rejection (U. S. patent application Ser. No. 362,544 filed Jun. 6,1989).

They are lipophilic antibiotics that inhibit the transcription of T cell activation genes and/or signal transduction pathways involved in T cell activation. This agent inhibits the proliferative response of lymphocytes to alloantigen stimulation, and a variety of T cell associated immune reaction.

The compound suppresses immune responses in vivo as well as in vitro and is more highly potent than cyclosporin. Studies reveal that as Rapamycin appear to cause fewer side effects than standard anti rejection treatment due to its novel mode of action, and thus the immunosuppressive action of Rapamycin is applicable in organ transplantation.

Rapamycin is a macrocyclic triene antibiotic produced by Streptomyces lzygYOoCcopicus, which was found to have antifungal activity, particularly against Candida albicans, both in vitro and in vivo [C. Vezina et al. , J. Antibiot. 28,721 (1975); S. N. Seghal et al., J. Antibiot. 28,727 (1975); H. A. Baker et al., J. Antibiot. 31,539 (1978); US 3,922, 992; and US 3, 993, 749].

U. S. Pat. No. 3, 929, 992 to Ayerst discloses the macrolide compound rapamycin and its antibiotic and antifungal properties. Recent publications, (see J. of Immunology Vol. 144, p. 251-258 (No. 1>, Jan. 1990 by F. J.

Dumont et. al. ,) disclose the use of the compound additionally as an immunosuppressant.

US 3,993, 749 disclose Rapamycin as a chemical compound producible by culturing a rapamycin-producing organism in an aqueous nutrient medium. The compound has the property of adversely affecting the

growth of fungi, for example, Candida albicans and Microsporum gypseum.

Fermentation and purification of Rapamycin and 30-demethoxy Rapamycin have been described in the literature (C. Vezina et al. J.

Antibiot. (Tokyo), 1975,28 (10), 721; S. N. Sehgal et al., J. Antibiot.

(Tokyo), 1975,28 (10), 727; 1983,36 (4), 351 ; N. L. Pavia et al. , J. Natural Products, 1991, 54 (1), 167-177).

The prior art literature does not disclose production of compound of Formula I or any of its salt form, by solid substrate fermentation or solid state fermentation with fed-batch technique.

SUMMARY OF THE INVENTION The present invention provides a novel method for production of compound of Formula I or its salts.

In preferred embodiments, the invention provides a fermentation process in which the compound of Formula I or any of it's salt form, is produced on solid nutritious matrix. The fermentation is also carried out in fed-batch mode to increase the productivity/yields of the final product. The fermentation is carried out in a contained bio-reactor.

DETAILED DESCRIPTION OF PREFERRED EMBODIMENTS Definitions "Solid state fermentation"or"solid state cultivation": The term "solid state fermentation"or"solid state cultivation", sometimes referred to as"semi-solid state fermentation"as used herein, means the process of fermenting microorganisms on a solid medium that provides anchorage points for the microorganisms in the absence of any freely flowing substance. The amount of water in the solid medium can be any amount of

water. For example, the solid medium could be almost dry, or it could be slushy. A person skilled in the art knows that the terms"solid state fermentation"and"semi-solid state fermentation"are interchangeable.

"Fed-batch fermentation"or"fed-batch technique" : The term fed-batch fermentation as used herein, means a fermentation process carried out where substrate or nutrients are added in small increments as the fermentation progresses. The substrate or nutrient is added in small increments that would encourage the production of secondary metabolites, because some secondary metabolite production is inhibited by high concentrations of substrate or substrates, so this method would encourage the production of such metabolites. Supplement of nutrients at a time when the initially fed nutrient are consumed by the microorganisms or culture also help in providing more energy to the microorganism which in turn increases the overall production of the secondary metabolites.

"Bioreactor": The term"bioreactor"as used herein, means a device capable of holding fermentation media inoculated with microorganism and carrying out the process of solid state fermentation in a contained manner.

A bioreactor can be used to grow any microorganism capable of growing under specified conditions in a contained environment. Some examples of microorganisms capable of growing in a bioreactor are fungi, yeast and bacteria.

The present invention discloses a process for production of compound of Formula I or its any salt form, by culturing a microorganism capable of producing such compound on solid nutrient matrix wherein,

optionally the nutrients are fed in adequate quantities during the growth of the culture so that the production of the product increases significantly.

The instant invention discloses a process for the manufacture of compound of Formula I and its salts by solid substrate fermentation.

The solid substrate fermentation is carried out using Streptomyces 16voscopicus.

The solid substrate for fermentation is selected from wheat bran, wheat rawa, oat meal, broken wheat, boiled rice, rice bran, rice rawa, beaten rice, maize bran, maize grits, oat bran, bagasse, tapioca residue, soy grits, soy flakes, rice flakes, ceramic beads, glass beads, sponge or a mixture of two or more of these.

The solid substrate fermentation is a fed-batch fermentation.

The feeding for fed-batch fermentation is done at the beginning of the fermentation or at intervals throughout the fermentation.

The carbon source for feeding is selected from glucose, sucrose, starch (maize, wheat, tapioca, potato), modified starch, maltose, malto- dextrin, soybean oil, acetate or a mixture of two or more of these.

The nitrogen source for feeding is selected from ammonium sulphate, dried yeast, ammonium nitrate, sodium nitrate, bacteriological peptone, yeast extract, casein hydrolyzate, soy peptone, soy flour, cotton seed flour, corn steep liquor or a mixture of two or more of these.

The first aspect of the invention is production of compound of Formula I or its any salt form. The compound is afforded by culturing Streptomyces hygroscopicus on solid nutrient matrix e. g. wheat bran, wheat rawa, broken wheat, boiled rice, rice bran, rice rawa, beaten rice, rice flakes, maize bran, maize grits, oat bran, bagasse, tapioca residue, soy grits,

soy flakes, ceramic beads, glass beads, sponge or a mixture of one or more of these. The product is then purified by conventional techniques comprising filtration, centrifugation, chromatography, extraction, distillation, concentration, precipitation, crystallization and drying.

The second aspect of invention is production of compound of Formula I or its any salt form. The compound is afforded by culturing Streptomyces hygroscopicus on solid nutrient matrix e. g. wheat bran, oatmeal, soybean meal, wheat flour, soybean flakes, maize bran etc. The culture is then fed with nutrients to increase production of the final product.

The product is purified by conventional techniques comprising filtration, centrifugation, chromatography, extraction, distillation, concentration, precipitation, crystallization and drying.

The advantages of the present invention over the other reported methods are: (i) cost effective process (ii) higher productivity of compound of Formula I with feeding (iii) self-contained bioreactor decreases hazardous exposure and risk of contamination.

The following Examples further illustrate the invention, it being understood that the invention is not intended to be limited by the details disclosed therein.

EXAMPLE 1 A well grown slant of Streptomyces hygroscopicus was taken and 5ml of distilled water was added. It was shaken thoroughly and 4ml of this

spore suspension was used for the inoculation of 400ml seed medium taken in 2000 ml conical flask. The composition of seed medium is as follows: Glucose 20g/L Defatted toasted soyaflour 40g/L Ammonium sulphate 3g/L Calcium carbonate = 1. 5g/L pH of this medium is adjusted to 7 after making up the volume with water. The seed flasks were grown at 28°C for 4 days and used as an inoculum for solid state fermentation.

Solid state fermentation : l Ogm each of wheat bran, maize flakes, wheat rawa, rice rawa, oat meal, maize bran, rice bran, were taken in separate petri plates. Adequate amount of water was added and sterilized at 121 deg C for 30 minutes. 10 ml inoculum from 4 day old seed medium was added. The entire substrate was mixed properly with the inoculum and incubated at 28 deg C for 7 days. Following results were obtained. Substrates Rapamycin mg/kg substrate wheat bran 216 oat meal 930 maize grits 105 soy grits 30 Maize bran 166 rice bran 39

EXAMPLE 2 Solid state fermentation was conducted as in Example 1 using 75 g ceramic beads as the solid support in a petri-plate, 15 mL of Streptonzyces hygroscopicus inoculum grown in seed medium was added. The result obtained is given in the table below.

Solid substrate Rapamycin mg/kg substrate Ceramic beads 121

EXAMPLE 3 Solid state fermentation was conducted as in Example 1 using different solid supports in combination. l Ogm of this substrate is taken in petri plate and 10ml of Streptomyces hygroscopicus inoculum grown in seed medium was added. The results obtained are given in the table below. Solid substrates Rapamycin mg/kg substrate Wheat bran + oat meal 320 Wheat bran + oat meal + soy flakes 612 Wheat bran + oatmeal + wheat rawa 568 Wheat bran + maize bran 41 EXAMPLE 4

Solid state fermentation was conducted as in Example 3 using a mixture of wheat bran, wheat rawa and oat meal. 10gm of this substrate is taken in petri plate and 10ml of Streptomyces hygroscopicus inoculum grown in seed medium was added along with a liquid nutrient feed consisting of

glucose and dried yeast. The feed was added every alternate day up to 4 day. Solid substrates Rapamycin mg/kg substrate Without feed 915 With feed 1510 EXAMPLE 5 Seed inoculum of Streptomyces hygroscopicus is obtained as explained in Example 1. 3. 5L of this inoculum was used for inoculating 35 L of the same seed medium taken in a 50L fermenter. This is grown for 48 hr at 28°C. This is used as an inoculum for solid state fermentation. 15 kg of substrate mixture consisting of wheat bran, wheat rawa and oat meal was loaded into a bioreactor having 22600 cm2 surface area. The bioreactor was sterilised at 121 deg C for 1 to 2 hours using steam. After the sterilization the temperature of the solid substrate was brought down to 28 deg C. 15 L of the above inoculum was added to the solid substrate along with 2 L of glucose and dried yeast feed and mixed. This was incubated at 27 to 29 deg C. On 2nd and 4dl day 2 L of the above feed was added to the solid substrate matrix and mixed well. The entire biomass along with the solid substrate was harvested on 7 day and processed to get pharmaceutically acceptable grade of rapamycin.