RNA SECONDARY STRUCTURE PREDICTION SYSTEM AND METHOD

Japanese Patent JP2944434

B2

PURPOSE: To provide the subject system sufficiently small in the computational amounts for searching and capable of also predicting long-range interactions.
CONSTITUTION: This system is made up of a base pair preserving section 11 to make or preserve any base pairs in an RNA sequence, an imaginary distance preserving section 12 to preserve the imaginary distance between any base pairs in the RNA sequence, an energy computational section 14 to calculate the respective energies in a loop composed of plural bases and a stack region composed of base pairs, a secondary structure preserving section 13 to preserve predicted stack regions, and a prediction control section 15 to control the above- mentioned four sections and predict the objective RNA secondary structure by predicting the stack regions one by one.

WO/1994/008625	COMBINATION OF ANTINEOPLASTIC AGENT AND ANTISENSE OLIGONUCLEOTIDES FOR TREATMENT OF CANCER
WO/2023/250119	METHODS OF PRODUCING RNA
WO/2004/094603	TRANSGENIC MOUSE WITH SIMPLIFIED DH LOCUS

ASOGAWA MINORU

JP30370894A

September 06, 1999

December 07, 1994

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NIPPON DENKI KK
GIJUTSU KENKYU KUMIAI SHINJOHO SHORI KAIHATSU KIKO

C12N15/00; C12Q1/68; G06F17/00; G06F17/30; G06F19/16; G06Q10/04; (IPC1-7): C12N15/00; G06F17/00

Ａｎｎ．Ｒｅｖ．Ｂｉｏｐｈｙｓ．Ｃｈｅｍ．１９８８．１７：１６７−１９２
ｂｉｔ，Ｖｏｌ．２５，Ｎｏ．１０，１９９３．ｐｐ．８３−９１（１９９３）
Ｎｕｃｌｅｉｃ Ａｃｉｄ Ｒｅｓｅａｒｃｈ．Ｖｏｌ．１０，Ｎｏ．１，１９８２，ｐｐ．２６５−２７８
Ｎｕｃｌｅｉｃ Ａｃｉｄ Ｒｅｓｅａｒｃｈ．Ｖｏｌ．６，Ｎｏ．９，１９７８，ｐｐ．３３６５−３３８７
情報学シンポジウム，（１９９２．１） ｐｐ．１２５−１３４

Masao Matsumoto (2 outside)
Masao Matsumoto

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